RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 MCCC1Q96RQ3 725 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 C19orf43Q9BQ61 176 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 MTG2Q9H4K7 406 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 IGSF5Q9NSI5 407 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 CORO1CQ9ULV4 474 aaPredicted RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 SLC12A4Q9UP95 1085 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 RUVBL2Q9Y230 463 aaKnown RBP20.92■□□□□ 0.94
GPC1-202ENST00000420138 MED16Q9Y2X0 877 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 WASF2Q9Y6W5 498 aa20.92■□□□□ 0.94
GPC1-202ENST00000420138 KIF26AQ9ULI4 1882 aaPredicted RBP20.91■□□□□ 0.94
GPC1-202ENST00000420138 A0A087X1B8 175 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 SOX1O00570 391 aaPredicted RBP20.91■□□□□ 0.94
GPC1-202ENST00000420138 KLHL2O95198 593 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 UGT2B4P06133 528 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 SRPRAP08240 638 aaKnown RBP20.91■□□□□ 0.94
GPC1-202ENST00000420138 CPA3P15088 417 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 FDXRP22570 491 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 LTBRP36941 435 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 ATG14Q6ZNE5 492 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 TSPAN33Q86UF1 283 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 THOC1Q96FV9 657 aaKnown RBP20.91■□□□□ 0.94
GPC1-202ENST00000420138 UBXN10Q96LJ8 280 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 TCF12Q99081 682 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 FAM96AQ9H5X1 160 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 ELOVL2Q9NXB9 296 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 PKP3Q9Y446 797 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 XIRP2A4UGR9 3374 aa20.91■□□□□ 0.94
GPC1-202ENST00000420138 C1orf232A0A0U1RR37 186 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 GPR39O43194 453 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 DNAJC8O75937 253 aaPredicted RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 ASLP04424 464 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 PMLP29590 882 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 SUOXP51687 545 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 SLC12A2P55011 1212 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 OVGP1Q12889 678 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 ILF2Q12905 390 aaKnown RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 TTC31Q49AM3 519 aaPredicted RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 NAIF1Q69YI7 327 aaPredicted RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 FAM45BPQ6NSW5 357 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 CRTC1Q6UUV9 634 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 PIM3Q86V86 326 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 PHTF2Q8N3S3 785 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 FSTL5Q8N475 847 aaPredicted RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 FAM45AQ8TCE6 357 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 ANKRD49Q8WVL7 239 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 C7orf26Q96N11 449 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 AARSD1Q9BTE6 412 aaKnown RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 THG1LQ9NWX6 298 aaKnown RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 COL4A3Q01955 1670 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 TK2O00142 265 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 ATP5BP06576 529 aaKnown RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 CA5AP35218 305 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 GLRBP48167 497 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 RAD51Q06609 339 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 GALNTL6Q49A17 601 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 ATG16L1Q676U5 607 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 GDPD4Q6W3E5 623 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 HEXDCQ8WVB3 486 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 CHFRQ96EP1 664 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 TSPAN17Q96FV3 270 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 MSLNLQ96KJ4 702 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 GAS2L1Q99501 681 aaPredicted RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 HEPHQ9BQS7 1158 aa20.9■□□□□ 0.94
GPC1-202ENST00000420138 CPSF2Q9P2I0 782 aaKnown RBP20.9■□□□□ 0.94
GPC1-202ENST00000420138 UBOX5O94941 541 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 CTSLP07711 333 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 LHCGRP22888 699 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 ARRB2P32121 409 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 MTHFRP42898 656 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 SEMG2Q02383 582 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 SETMARQ53H47 684 aaPredicted RBP20.89■□□□□ 0.93
GPC1-202ENST00000420138 LRRC8EQ6NSJ5 796 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 TPRG1Q6ZUI0 275 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 SFTPA1Q8IWL2 248 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 GRIN3AQ8TCU5 1115 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 LRCH3Q96II8 777 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 KLHL32Q96NJ5 620 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 BIRC8Q96P09 236 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 GPAMQ9HCL2 828 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 IL26Q9NPH9 171 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 DEC1Q9P2X7 70 aa20.89■□□□□ 0.93
GPC1-202ENST00000420138 FNDC3AQ9Y2H6 1198 aaKnown RBP20.89■□□□□ 0.93
GPC1-202ENST00000420138 A8MX80 341 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 TGDSO95455 350 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 BPIP17213 487 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 NNMTP40261 264 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 CCDC15Q0P6D6 951 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 GRM2Q14416 872 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 COL19A1Q14993 1142 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 ZRANB3Q5FWF4 1079 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 C10orf82Q8WW14 230 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 RMDN2Q96LZ7 410 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 UNKQ9C0B0 810 aaKnown RBP20.88■□□□□ 0.93
GPC1-202ENST00000420138 BRD9Q9H8M2 597 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 USH1CQ9Y6N9 552 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 ITM2AO43736 263 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 OR1I1O60431 355 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 LEFTY1O75610 366 aa20.88■□□□□ 0.93
GPC1-202ENST00000420138 APOA4P06727 396 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms