RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 B4DGG1 531 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 KCNK1O00180 336 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 PDE2AO00408 941 aaPredicted RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 RRP8O43159 456 aaKnown RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 CLDN7O95471 211 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 JCHAINP01591 159 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 FGF1P05230 155 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 RPLP0P05388 317 aaKnown RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 IVLP07476 585 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 GLB1P16278 677 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF30P17039 623 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 MX2P20592 715 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 CES1P23141 567 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 AK4P27144 223 aaPredicted RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 ARHGAP25P42331 645 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 B4GALNT1Q00973 533 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 ITKQ08881 620 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 TAZQ16635 292 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 QPCTQ16769 361 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 RAET1GQ6H3X3 334 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 NPNTQ6UXI9 565 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 ADAMTSL4Q6UY14 1074 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 LRRC69Q6ZNQ3 347 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF765Q7L2R6 523 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 SPRED1Q7Z699 444 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 CLEC14AQ86T13 490 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 RHOT2Q8IXI1 618 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 TC2NQ8N9U0 490 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF248Q8NDW4 579 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 OR6C4Q8NGE1 309 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 WDR36Q8NI36 951 aaKnown RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 TADA1Q96BN2 335 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 EID2BQ96D98 161 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 COX14Q96I36 57 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 TRIB3Q96RU7 358 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 LRRN3Q9H3W5 708 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 PCDH9Q9HC56 1237 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 TRNAU1APQ9NX07 287 aaKnown RBP11□□□□□ -0.65
SSBP3-206ENST00000420121 MOSPD1Q9UJG1 213 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 PLEKHM1Q9Y4G2 1056 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 HYOU1Q9Y4L1 999 aa11□□□□□ -0.65
SSBP3-206ENST00000420121 NUDT21O43809 227 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 PNLIPP16233 465 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 NFKBIAP25963 317 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CCKBRP32239 447 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 ADCY8P40145 1251 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CD86P42081 329 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 GPR1P46091 355 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 GNPDA1P46926 289 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 MAZP56270 477 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 RPL26P61254 145 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CTBSQ01459 385 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 ZFP36L1Q07352 338 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 NR1D2Q14995 579 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 LRRC38Q5VT99 294 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 SARM1Q6SZW1 724 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 PCSK4Q6UW60 755 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 MFSD7Q6UXD7 560 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF438Q7Z4V0 828 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 TRIM74Q86UV6 250 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CCNJLQ8IV13 435 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 RAVER1Q8IY67 606 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 NAGSQ8N159 534 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CCNYQ8ND76 341 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 LPCAT1Q8NF37 534 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 PATE1Q8WXA2 126 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 AP2M1Q96CW1 435 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 NAF1Q96HR8 494 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CCDC42Q96M95 316 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 GFM1Q96RP9 751 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 RIOK2Q9BVS4 552 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CEP41Q9BYV8 373 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 FOXP3Q9BZS1 431 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 DPEP2Q9H4A9 486 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 SYNDIG1Q9H7V2 258 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 ZNHIT6Q9NWK9 470 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 TAAR2Q9P1P5 351 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 LRIT1Q9P2V4 623 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 INTUQ9ULD6 942 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 ATXN7L1Q9ULK2 861 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 CNOT6Q9ULM6 557 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 RPL26L1Q9UNX3 145 aaKnown RBP10.99□□□□□ -0.65
SSBP3-206ENST00000420121 TMEM98Q9Y2Y6 226 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 TTLL3Q9Y4R7 772 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 HEY1Q9Y5J3 304 aa10.99□□□□□ -0.65
SSBP3-206ENST00000420121 GOLGA6CA6NDK9 693 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 GOLGA6BA6NDN3 693 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 FADS2P1A8MWK0 482 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 ANKRD66B4E2M5 251 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 AKR1B15C9JRZ8 316 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 APOL1O14791 398 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 B4GAT1O43505 415 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 KRT1P04264 644 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 GOLGA6DP0CG33 693 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 COMTP21964 271 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 NOP2P46087 812 aaKnown RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 EPHB1P54762 984 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 HADHBP55084 474 aaKnown RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 ADCY2Q08462 1091 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms