RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ARRDC3Q96B67 414 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ALKBH8Q96BT7 664 aaKnown RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 AGAP2Q99490 1192 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 IRF2BPLQ9H1B7 796 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 RHOJQ9H4E5 214 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 DYRK4Q9NR20 520 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 ARHGEF3Q9NR81 526 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 IARS2Q9NSE4 1012 aaKnown RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 POLR3BQ9NW08 1133 aaPredicted RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 MKS1Q9NXB0 559 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 TXNDC16Q9P2K2 825 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 FBXO5Q9UKT4 447 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 CKAP5Q14008 2032 aa14.23□□□□□ -0.13
SHMT1P1-201ENST00000419974 KPNA3O00505 521 aaPredicted RBP14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 GAPDHSO14556 408 aaPredicted RBP14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 PFDN6O15212 129 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 CD3EAPO15446 510 aaKnown RBP14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 SPINT1O43278 529 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 RNF40O75150 1001 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 CLDN7O95471 211 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 S1PR4O95977 384 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 IL1BP01584 269 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 AHSGP02765 367 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 ITGA2BP08514 1039 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 BPIP17213 487 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 DRD3P35462 400 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 SPAM1P38567 509 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 MAGEA12P43365 314 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 SLCO1A2P46721 670 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 TTPAP49638 278 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 RPS14P62263 151 aaKnown RBP14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 CACNG1Q06432 222 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 ARHGEF7Q14155 803 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 LRRC32Q14392 662 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 FBXL19Q6PCT2 694 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 LIPIQ6XZB0 460 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 TECPR1Q7Z6L1 1165 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 STRA8Q7Z7C7 330 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 EXOC3L1Q86VI1 746 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 LCA5Q86VQ0 697 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 ZC3HC1Q86WB0 502 aaKnown RBP14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 MMAAQ8IVH4 418 aaKnown RBP14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 KRT222Q8N1A0 295 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 OR6P1Q8NGX9 317 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 GPR22Q99680 433 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 KDM4CQ9H3R0 1056 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 IL26Q9NPH9 171 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 CATSPERZQ9NTU4 200 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 SMOXQ9NWM0 555 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 PKD2L2Q9NZM6 624 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 FZD4Q9ULV1 537 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 PSAT1Q9Y617 370 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 KMT2EQ8IZD2 1858 aa14.22□□□□□ -0.13
SHMT1P1-201ENST00000419974 ANKRD36A6QL64 1941 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 C10orf142B7Z368 130 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 TSPAN6O43657 245 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 ATG13O75143 517 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 SRP72O76094 671 aaKnown RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 KLF8O95600 359 aaPredicted RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 PDGFBP01127 241 aaPredicted RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 HOXB2P14652 356 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 XPAP23025 273 aaPredicted RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 GABRB3P28472 473 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 PPARGP37231 505 aaPredicted RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 P2RY2P41231 377 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 SLC1A2P43004 574 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 SLC18A2Q05940 514 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 DPTQ07507 201 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 FZD5Q13467 585 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 NFATC2Q13469 925 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 FASTKD1Q53R41 847 aaKnown RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 PIP5KL1Q5T9C9 394 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 ZNF470Q6ECI4 717 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 NEK5Q6P3R8 708 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 MAMSTRQ6ZN01 415 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 SYT13Q7L8C5 426 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 SNX20Q7Z614 316 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 TSPAN33Q86UF1 283 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 KBTBD6Q86V97 674 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 TXNDC5Q8NBS9 432 aaKnown RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 PRSS33Q8NF86 280 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 COQ10AQ96MF6 247 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 SMIM14Q96QK8 99 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 IER2Q9BTL4 223 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 CTNNAL1Q9UBT7 734 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 NOVA2Q9UNW9 492 aaKnown RBP14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 FADS3Q9Y5Q0 445 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 COMMD10Q9Y6G5 202 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 F5P12259 2224 aa14.21□□□□□ -0.13
SHMT1P1-201ENST00000419974 KANSL1LA0AUZ9 987 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 ANTXRLA6NF34 631 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 PRPF4O43172 522 aaKnown RBP eCLIP14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 IGLV3-19P01714 112 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 C1SP09871 688 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 MC4RP32245 332 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 CD151P48509 253 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 SEC13P55735 322 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 TCF15Q12870 199 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 ITGA9Q13797 1035 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms