RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CAMK2BQ13554 666 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 TCEA2Q15560 299 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 PCSK7Q16549 785 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 CCDC181Q5TID7 509 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 AADACL2Q6P093 401 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 ADAMTSL4Q6UY14 1074 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 KDELC2Q7Z4H8 507 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 SLC35F3Q8IY50 421 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 ZNF567Q8N184 647 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 ACTL9Q8TC94 416 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 FRMD8Q9BZ67 464 aaPredicted RBP20.25■□□□□ 0.83
GTF3A-202ENST00000419181 CYP4F12Q9HCS2 524 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 KLHL8Q9P2G9 620 aaPredicted RBP20.25■□□□□ 0.83
GTF3A-202ENST00000419181 ADGRG1Q9Y653 693 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 CAPN6Q9Y6Q1 641 aa20.25■□□□□ 0.83
GTF3A-202ENST00000419181 EME2A4GXA9 379 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-202ENST00000419181 PMPCBO75439 489 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 FTCDO95954 541 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 CAPNS1P04632 268 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 PYGLP06737 847 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 CETN2P41208 172 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 OTUD4Q01804 1114 aaKnown RBP20.24■□□□□ 0.83
GTF3A-202ENST00000419181 NR0B2Q15466 257 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 GUSBP11Q6P575 273 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 LYSMD3Q7Z3D4 306 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 GKN2Q86XP6 184 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 RNF10Q8N5U6 811 aaKnown RBP20.24■□□□□ 0.83
GTF3A-202ENST00000419181 IFI44Q8TCB0 444 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 SCG3Q8WXD2 468 aaKnown RBP20.24■□□□□ 0.83
GTF3A-202ENST00000419181 GLMNQ92990 594 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 EID2BQ96D98 161 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 AGAP2Q99490 1192 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 RIOK2Q9BVS4 552 aaKnown RBP20.24■□□□□ 0.83
GTF3A-202ENST00000419181 UBP1Q9NZI7 540 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 FAM153AQ9UHL3 310 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 PACSIN2Q9UNF0 486 aaPredicted RBP20.24■□□□□ 0.83
GTF3A-202ENST00000419181 DOLKQ9UPQ8 538 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 SLC17A4Q9Y2C5 497 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 RP1P56715 2156 aa20.24■□□□□ 0.83
GTF3A-202ENST00000419181 H7C0C1 242 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 DDX3YO15523 660 aaKnown RBP20.23■□□□□ 0.83
GTF3A-202ENST00000419181 ARHGAP6O43182 974 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 OPA1O60313 960 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 TJP3O95049 919 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 NDST3O95803 873 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 FUCA1P04066 466 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 JUPP14923 745 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 RBL1P28749 1068 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 ATP5OP48047 213 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 SPINT3P49223 89 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 RPIAP49247 311 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 KDELC1Q6UW63 502 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 PID1Q7Z2X4 250 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 CACTIN-AS1Q8N1I8 211 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 UBL4BQ8N7F7 174 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 ARL10Q8N8L6 244 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 CCDC112Q8NEF3 446 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 CCHCR1Q8TD31 782 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 FCRL5Q96RD9 977 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 WDR24Q96S15 920 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 TMEM168Q9H0V1 697 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 C10orf88Q9H8K7 445 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 ZFYVE1Q9HBF4 777 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 MAGEE1Q9HCI5 957 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 PKD2L2Q9NZM6 624 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 MOSPD1Q9UJG1 213 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 TRHDEQ9UKU6 1024 aa20.23■□□□□ 0.83
GTF3A-202ENST00000419181 CPED1A4D0V7 1026 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 RGSL1A5PLK6 1076 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 PIRTP0C851 137 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 HENMT1Q5T8I9 393 aaKnown RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 EFL1Q7Z2Z2 1120 aaKnown RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 DCBLD1Q8N8Z6 715 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 KYQ8NBH2 561 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 PTCD2Q8WV60 388 aaKnown RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 OXNAD1Q96HP4 312 aaPredicted RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 HES6Q96HZ4 224 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 TSGA10Q9BZW7 698 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 CARS2Q9HA77 564 aaKnown RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 GPR34Q9UPC5 381 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 CLCA2Q9UQC9 943 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 ZNF711Q9Y462 761 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 SCN8AQ9UQD0 1980 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 DMXL2Q8TDJ6 3036 aa20.22■□□□□ 0.83
GTF3A-202ENST00000419181 COL27A1Q8IZC6 1860 aaPredicted RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 ARHGEF17Q96PE2 2063 aaPredicted RBP20.22■□□□□ 0.83
GTF3A-202ENST00000419181 ANKRD11Q6UB99 2663 aaPredicted RBP20.21■□□□□ 0.83
GTF3A-202ENST00000419181 LOC285095A0A1B0GVY8 99 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 EPOP01588 193 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 IVLP07476 585 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 RBP3P10745 1247 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 POLD2P49005 469 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 WNT3AP56704 352 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 EIF3EP60228 445 aaKnown RBP20.21■□□□□ 0.83
GTF3A-202ENST00000419181 TARDBPQ13148 414 aaKnown RBP eCLIP20.21■□□□□ 0.83
GTF3A-202ENST00000419181 CDCP2Q5VXM1 449 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 CCDC70Q6NSX1 233 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 TAF8Q7Z7C8 310 aa20.21■□□□□ 0.83
GTF3A-202ENST00000419181 CDKL3Q8IVW4 592 aaPredicted RBP20.21■□□□□ 0.83
GTF3A-202ENST00000419181 PDCD7Q8N8D1 485 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms