RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KRIT1O00522 736 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 MAFKO60675 156 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 CCDC175P0C221 793 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 CDKN2BP42772 138 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 RECQLP46063 649 aaPredicted RBP18.01■□□□□ 0.47
VCP-202ENST00000417448 CLCN6P51797 869 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 THOP1P52888 689 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 MAPK10P53779 464 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 ZFP36L1Q07352 338 aaKnown RBP18.01■□□□□ 0.47
VCP-202ENST00000417448 SLC10A7Q0GE19 358 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 SGCGQ13326 291 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 NYAP1Q6ZVC0 841 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 TMPRSS9Q7Z410 1059 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 KATNAL2Q8IYT4 538 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 PCDH20Q8N6Y1 951 aaKnown RBP18.01■□□□□ 0.47
VCP-202ENST00000417448 TSEN2Q8NCE0 465 aaKnown RBP18.01■□□□□ 0.47
VCP-202ENST00000417448 DENND6BQ8NEG7 585 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 ALG3Q92685 438 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 VOPP1Q96AW1 172 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 HAUS1Q96CS2 278 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 CEP44Q9C0F1 390 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 KCNK4Q9NYG8 393 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 DONSONQ9NYP3 566 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 AMFRQ9UKV5 643 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 PLAAQ9Y263 795 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 PCDHB11Q9Y5F2 797 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 PCDHA3Q9Y5H8 950 aa18.01■□□□□ 0.47
VCP-202ENST00000417448 ZSCAN5CA6NGD5 496 aaPredicted RBP18■□□□□ 0.47
VCP-202ENST00000417448 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18■□□□□ 0.47
VCP-202ENST00000417448 ZRANB2O95218 330 aaKnown RBP eCLIP18■□□□□ 0.47
VCP-202ENST00000417448 PEX11BO96011 259 aa18■□□□□ 0.47
VCP-202ENST00000417448 CTNNA1P35221 906 aaKnown RBP18■□□□□ 0.47
VCP-202ENST00000417448 PEX5P50542 639 aa18■□□□□ 0.47
VCP-202ENST00000417448 IL10RBQ08334 325 aa18■□□□□ 0.47
VCP-202ENST00000417448 PTK2BQ14289 1009 aa18■□□□□ 0.47
VCP-202ENST00000417448 MYLK3Q32MK0 819 aa18■□□□□ 0.47
VCP-202ENST00000417448 FAXCQ5TGI0 409 aa18■□□□□ 0.47
VCP-202ENST00000417448 MACC1Q6ZN28 852 aa18■□□□□ 0.47
VCP-202ENST00000417448 PEX26Q7Z412 305 aa18■□□□□ 0.47
VCP-202ENST00000417448 ATPAF2Q8N5M1 289 aa18■□□□□ 0.47
VCP-202ENST00000417448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18■□□□□ 0.47
VCP-202ENST00000417448 TRAF3IP1Q8TDR0 691 aaPredicted RBP18■□□□□ 0.47
VCP-202ENST00000417448 ASB12Q8WXK4 309 aa18■□□□□ 0.47
VCP-202ENST00000417448 NSMCE3Q96MG7 304 aa18■□□□□ 0.47
VCP-202ENST00000417448 HEPHQ9BQS7 1158 aa18■□□□□ 0.47
VCP-202ENST00000417448 DTLQ9NZJ0 730 aa18■□□□□ 0.47
VCP-202ENST00000417448 CACNA1DQ01668 2161 aa18■□□□□ 0.47
VCP-202ENST00000417448 LRBAP50851 2863 aa18■□□□□ 0.47
VCP-202ENST00000417448 APOL1O14791 398 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 KRT86O43790 486 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 CST8O60676 142 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 CTNNA2P26232 953 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 SERPINB6P35237 376 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 ARSDP51689 593 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 GEMIN4P57678 1058 aaKnown RBP17.99■□□□□ 0.47
VCP-202ENST00000417448 GALNT2Q10471 571 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 TAZQ16635 292 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 SLC9A4Q6AI14 798 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 RCOR2Q8IZ40 523 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 TXLNBQ8N3L3 684 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 PGBD5Q8N414 524 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 OR2AP1Q8NGE2 309 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 ISG20Q96AZ6 181 aaKnown RBP17.99■□□□□ 0.47
VCP-202ENST00000417448 TUBD1Q9UJT1 453 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 ANAPC2Q9UJX6 822 aa17.99■□□□□ 0.47
VCP-202ENST00000417448 hCG_1818297A0A087WSY0 165 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 DDX3YO15523 660 aaKnown RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 TSPAN6O43657 245 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 NRDCO43847 1150 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 PIGNO95427 931 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 GSRP00390 522 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 UGT2B4P06133 528 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 PYGMP11217 842 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 PECAM1P16284 738 aaPredicted RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 MAXP61244 160 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 SNRPD1P62314 119 aaKnown RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 PPARDQ03181 441 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 LBRQ14739 615 aaKnown RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 IFI16Q16666 785 aaKnown RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 INO80DQ53TQ3 878 aaPredicted RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 LRRC73Q5JTD7 316 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 CCNJLQ8IV13 435 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 SFTPA2Q8IWL1 248 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 Q8N9G6 341 aaPredicted RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 CCNYQ8ND76 341 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 EXD1Q8NHP7 514 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 PMEPA1Q969W9 287 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 FAM118BQ9BPY3 351 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 CINPQ9BW66 212 aaPredicted RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 TSGA10Q9BZW7 698 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 LRRC4CQ9HCJ2 640 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 ZNF71Q9NQZ8 489 aaPredicted RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 MBNL1Q9NR56 388 aaKnown RBP17.98■□□□□ 0.47
VCP-202ENST00000417448 IGSF5Q9NSI5 407 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 DOLKQ9UPQ8 538 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.98■□□□□ 0.47
VCP-202ENST00000417448 RNF215Q9Y6U7 377 aa17.98■□□□□ 0.47
VCP-202ENST00000417448 IGSF6O95976 241 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms