RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 SYCP3Q8IZU3 236 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 LRRC43Q8N309 656 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 COLGALT1Q8NBJ5 622 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ZNF548Q8NEK5 533 aaPredicted RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 MPLKIPQ8TAP9 179 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 URGCPQ8TCY9 931 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ZNF689Q96CS4 500 aaPredicted RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CCDC51Q96ER9 411 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ZDHHC12Q96GR4 267 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 PAGE5Q96GU1 130 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 GUCD1Q96NT3 240 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CASD1Q96PB1 797 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 TGS1Q96RS0 853 aaKnown RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 GAD1Q99259 594 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 PYM1Q9BRP8 204 aaKnown RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 NFKBIZQ9BYH8 718 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 LRRC27Q9C0I9 530 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 TMEM117Q9H0C3 514 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CXCL16Q9H2A7 254 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CHST8Q9H2A9 424 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ELAC1Q9H777 363 aaKnown RBP4.67□□□□□ -1.66
PTPRK-209ENST00000415046 FAM204AQ9H8W3 233 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 C17orf75Q9HAS0 396 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 CACNG4Q9UBN1 327 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 SEL1LQ9UBV2 794 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 DNAJB4Q9UDY4 337 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 TBX20Q9UMR3 447 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 HPSEQ9Y251 543 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 TNFSF13BQ9Y275 285 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 LRP12Q9Y561 859 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 COMMD10Q9Y6G5 202 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 ANAPC1Q9H1A4 1944 aa4.67□□□□□ -1.66
PTPRK-209ENST00000415046 HELZP42694 1942 aaKnown RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MIA3Q5JRA6 1907 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 C5orf42Q9H799 3197 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 FAM237AA0A1B0GTK4 181 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 GOLGA8IPA6NC78 632 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 GOLGA8JA6NMD2 632 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 VSTM5A8MXK1 200 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CLDN3O15551 220 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 KLRC4O43908 158 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 TOM1L1O75674 476 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 INMTO95050 263 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 LDHAP00338 332 aaKnown RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 RPN1P04843 607 aaKnown RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CXCL8P10145 99 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MCF2P10911 925 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 FOSL2P15408 326 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 TPH1P17752 444 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 RBL1P28749 1068 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 NTSR1P30989 418 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 TNFSF9P41273 254 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 ACOT2P49753 483 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 COPAP53621 1224 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 SPAG1Q07617 926 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 GPM6BQ13491 265 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 POLD3Q15054 466 aaPredicted RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 POSTNQ15063 836 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MINDY4Q4G0A6 757 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MZT2AQ6P582 158 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 SLC39A4Q6P5W5 647 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 STXBP4Q6ZWJ1 553 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 UNC13DQ70J99 1090 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MEPCEQ7L2J0 689 aaKnown RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 ZNF720Q7Z2F6 126 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 C11orf44Q8N8P7 122 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 LRTOMTQ8WZ04 291 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 POMGNT1Q8WZA1 660 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CCDC47Q96A33 483 aaKnown RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 SAAL1Q96ER3 474 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 SLC39A13Q96H72 371 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CCDC34Q96HJ3 373 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 VPS50Q96JG6 964 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 ZNF558Q96NG5 402 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 ACCSQ96QU6 501 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 HIST1H2AAQ96QV6 131 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 FIZ1Q96SL8 496 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CDX2Q99626 313 aaPredicted RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MSTO1Q9BUK6 570 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CCDC94Q9BW85 323 aaPredicted RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MRPL9Q9BYD2 267 aaKnown RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 ZCWPW1Q9H0M4 648 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CWH43Q9H720 699 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 OLFML3Q9NRN5 406 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 TBC1D13Q9NVG8 400 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MIOSQ9NXC5 875 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MTMR10Q9NXD2 777 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 SEMA5BQ9P283 1151 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 DNAJB11Q9UBS4 358 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 CAPN11Q9UMQ6 739 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 EXOC7Q9UPT5 735 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 PRG3Q9Y2Y8 225 aaPredicted RBP4.66□□□□□ -1.66
PTPRK-209ENST00000415046 HS3ST3B1Q9Y662 390 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 PATJQ8NI35 1801 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 NOTCH4Q99466 2003 aa4.66□□□□□ -1.66
PTPRK-209ENST00000415046 MYOFQ9NZM1 2061 aa4.65□□□□□ -1.66
PTPRK-209ENST00000415046 COL6A3P12111 3177 aa4.65□□□□□ -1.67
PTPRK-209ENST00000415046 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
PTPRK-209ENST00000415046 FRMD3A2A2Y4 597 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms