RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 TOR1BO14657 336 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 HGSO14964 777 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 FGF10O15520 208 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 BNIP3LO60238 219 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 CTSLP07711 333 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 PNLIPP16233 465 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 GRNP28799 593 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 CXCR5P32302 372 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 UGT1A3P35503 534 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 CDKN2BP42772 138 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 NEK3P51956 506 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 AUHQ13825 339 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 DPYSL3Q14195 570 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 NAA30Q147X3 362 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 TAZQ16635 292 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 TPRG1LQ5T0D9 272 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 PHF19Q5T6S3 580 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 SPOCD1Q6ZMY3 1216 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 BZW1Q7L1Q6 419 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 CHSY1Q86X52 802 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 SH2D3CQ8N5H7 860 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 PCDH19Q8TAB3 1148 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 CPT1CQ8TCG5 803 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 ACTRT1Q8TDG2 376 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 TBC1D31Q96DN5 1066 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 PSMB7Q99436 277 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 KLF6Q99612 283 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 HOMER3Q9NSC5 361 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 GPATCH2LQ9NWQ4 482 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 SIRPGQ9P1W8 387 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 PPARGC1AQ9UBK2 798 aaKnown RBP13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 GGT7Q9UJ14 662 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 CDC23Q9UJX2 597 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 GPR34Q9UPC5 381 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 RNF215Q9Y6U7 377 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 MED13Q9UHV7 2174 aa13.59□□□□□ -0.23
RAPGEF1-204ENST00000414781 DRGXA6NNA5 263 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 TTLL8A6PVC2 850 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 NKX2-8O15522 239 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 AP1G1O43747 822 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 LRIG2O94898 1065 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 CLDN1O95832 211 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 TACR2P21452 398 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 EPHB2P29323 1055 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 YPEL5P62699 121 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 PPARDQ03181 441 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 CKAP4Q07065 602 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 CA9Q16790 459 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 WHAMMP3Q1A5X7 153 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 LONRF2Q1L5Z9 754 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 CRTC2Q53ET0 693 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 ANKRD20A8PQ5CZ79 823 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 RAP1GAP2Q684P5 730 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 RWDD4Q6NW29 188 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 MFSD7Q6UXD7 560 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 MACC1Q6ZN28 852 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 RFX8Q6ZV50 586 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 ZC3H18Q86VM9 953 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 RASGEF1CQ8N431 466 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 LZTR1Q8N653 840 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 TTC13Q8NBP0 860 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 FAF2Q96CS3 445 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 CSPG4P5Q96PW8 444 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 RNF157Q96PX1 679 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 DDA1Q9BW61 102 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 C1QTNF2Q9BXJ5 285 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 ZYG11BQ9C0D3 744 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 GPN2Q9H9Y4 310 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 ANLNQ9NQW6 1124 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 HS3ST2Q9Y278 367 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 KCTD3Q9Y597 815 aa13.58□□□□□ -0.24
RAPGEF1-204ENST00000414781 MTORP42345 2549 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 SPENQ96T58 3664 aaKnown RBP13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 IGLV3-10A0A075B6K4 115 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 hCG_1818297A0A087WSY0 165 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 GOLGA6L10A0A0M3HER8 536 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 TCAF2A6NFQ2 919 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 C3orf70A6NLC5 250 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 FGGP02679 453 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 PRKAR1AP10644 381 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 GLB1P16278 677 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 RHOQP17081 205 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 IL4RP24394 825 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 SERPINB6P35237 376 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 NR2C2P49116 596 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 C16orf72Q14CZ0 275 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 CLPPQ16740 277 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 C5orf22Q49AR2 442 aa13.57□□□□□ -0.24
RAPGEF1-204ENST00000414781 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms