RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 DCHS2Q6V1P9 2916 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 SSU72P8A0A1W2PR75 194 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 RASA4BC9J798 803 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 RASA4O43374 803 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 KDELR3O43731 214 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 EPHA4P54764 986 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 UBE2HP62256 183 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 GRM3Q14832 879 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 RWDD4Q6NW29 188 aaKnown RBP15.67■□□□□ 0.1
CPNE1-208ENST00000414711 NLRP14Q86W24 1093 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 ZNF354CQ86Y25 554 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 DNAAF5Q86Y56 855 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 PLXDC1Q8IUK5 500 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 PASD1Q8IV76 773 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 WDTC1Q8N5D0 677 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 LMO3Q8TAP4 145 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 NT5C3BQ969T7 300 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 ZNF641Q96N77 438 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-208ENST00000414711 OR2M4Q96R27 311 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 STN1Q9H668 368 aaKnown RBP15.67■□□□□ 0.1
CPNE1-208ENST00000414711 LATS2Q9NRM7 1088 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 GPR83Q9NYM4 423 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 LHX3Q9UBR4 397 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 B3GNT3Q9Y2A9 372 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 SLC17A4Q9Y2C5 497 aa15.67■□□□□ 0.1
CPNE1-208ENST00000414711 SPAG6O75602 509 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 IVLP07476 585 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 CMA1P23946 247 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 POLD2P49005 469 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 GFERP55789 205 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 CDK3Q00526 305 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 ACOX1Q15067 660 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 NUS1Q96E22 293 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 SMAD5Q99717 465 aaKnown RBP15.66■□□□□ 0.1
CPNE1-208ENST00000414711 BARD1Q99728 777 aaKnown RBP15.66■□□□□ 0.1
CPNE1-208ENST00000414711 GTPBP4Q9BZE4 634 aaKnown RBP15.66■□□□□ 0.1
CPNE1-208ENST00000414711 SYNCQ9H7C4 482 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 SARS2Q9NP81 518 aaKnown RBP15.66■□□□□ 0.1
CPNE1-208ENST00000414711 TMEM248Q9NWD8 314 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 OSGIN2Q9Y236 505 aa15.66■□□□□ 0.1
CPNE1-208ENST00000414711 COPG1Q9Y678 874 aaKnown RBP15.66■□□□□ 0.1
CPNE1-208ENST00000414711 A6NL46 340 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 ZNF185O15231 689 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 PMM2O15305 246 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 EML2O95834 649 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 PLEKP08567 350 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 SNRPB2P08579 225 aaKnown RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 FGF5P12034 268 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 RHOQP17081 205 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 HNRNPH3P31942 346 aaKnown RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 LAMB3Q13751 1172 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 SLC25A52Q3SY17 297 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 INO80DQ53TQ3 878 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 AFMIDQ63HM1 303 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 DOK6Q6PKX4 331 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 DPPA4Q7L190 304 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 FAM131BQ86XD5 332 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 CAMK1DQ8IU85 385 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 SMYD4Q8IYR2 804 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 C1orf131Q8NDD1 294 aaKnown RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 C9orf72Q96LT7 481 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 TRIM8Q9BZR9 551 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 ILKAPQ9H0C8 392 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 EPB41L1Q9H4G0 881 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 TMEM51Q9NW97 253 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 USP25Q9UHP3 1055 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 NTNG1Q9Y2I2 539 aa15.65■□□□□ 0.1
CPNE1-208ENST00000414711 KLF2Q9Y5W3 355 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-208ENST00000414711 TMEM63AO94886 807 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 COX6B1P14854 86 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 LPOP22079 712 aaPredicted RBP15.64■□□□□ 0.09
CPNE1-208ENST00000414711 SEPHS1P49903 392 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 HDAC4P56524 1084 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 RPS15P62841 145 aaKnown RBP15.64■□□□□ 0.09
CPNE1-208ENST00000414711 CETN1Q12798 172 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 ART3Q13508 389 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 PTPN20Q4JDL3 420 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 MANEALQ5VSG8 457 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 PPP1R3BQ86XI6 285 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 SH3KBP1Q96B97 665 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 TUBGCP5Q96RT8 1024 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 RETREG1Q9H6L5 497 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 LMBRD1Q9NUN5 540 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 NEU3Q9UQ49 428 aa15.64■□□□□ 0.09
CPNE1-208ENST00000414711 A8MX80 341 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 F5H423 210 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-208ENST00000414711 GADD45BO75293 160 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-208ENST00000414711 TIAF1O95411 115 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 C9P02748 559 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 PFKFB1P16118 471 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 SNX16P57768 344 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 RAPSNQ13702 412 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 CRB2Q5IJ48 1285 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 MIIPQ5JXC2 388 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 VWA5B1Q5TIE3 1220 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 FAM199XQ6PEV8 388 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-208ENST00000414711 CDH24Q86UP0 819 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 ADAMTS17Q8TE56 1095 aa15.63■□□□□ 0.09
CPNE1-208ENST00000414711 SCARF2Q96GP6 870 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms