RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SOCS6O14544 535 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 VCYO14598 125 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZBED4O75132 1171 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 NDUFS3O75489 264 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 JRKO75564 520 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 DAOP14920 347 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 IL7RP16871 459 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 MAPK4P31152 587 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 UBA7P41226 1012 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 CLCNKAP51800 687 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ART1P52961 327 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 BRWD1-AS2P59051 145 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ARF3P61204 181 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 PRAMEP78395 509 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ARF1P84077 181 aaKnown RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 DDR1Q08345 913 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 DLG1Q12959 904 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 GRIK2Q13002 908 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 MYBPHQ13203 477 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 RALBP1Q15311 655 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 FRG2Q64ET8 278 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 NADSYN1Q6IA69 706 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 JADE1Q6IE81 842 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 GLDNQ6ZMI3 551 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 IKBIPQ70UQ0 350 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 CCDC13Q8IYE1 715 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 HACE1Q8IYU2 909 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 PDILTQ8N807 584 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 OR14L1PQ8NHC6 308 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 RND1Q92730 232 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 MTBPQ96DY7 904 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 C1orf74Q96LT6 269 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZNF385AQ96PM9 386 aaKnown RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 KXD1Q9BQD3 176 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 PCGF1Q9BSM1 259 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 OCIAD1Q9NX40 245 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 SMARCAL1Q9NZC9 954 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZNF224Q9NZL3 707 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 UBA2Q9UBT2 640 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 ACSL5Q9ULC5 683 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 CORO1CQ9ULV4 474 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 MTMR6Q9Y217 621 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 LAS1LQ9Y4W2 734 aaKnown RBP3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 TOP2BQ02880 1626 aa3.81□□□□□ -1.8
HMGB1P11-201ENST00000413899 FRMD3A2A2Y4 597 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 GTPBP1O00178 669 aaKnown RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 DDNO94850 711 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 OR2C1O95371 312 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CLDN14O95500 239 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 FGF3P11487 239 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 TKTP29401 623 aaKnown RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CASP2P42575 452 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 PDLIM4P50479 330 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CSNK2A1P68400 391 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 MRPS34P82930 218 aaKnown RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 TFAP4Q01664 338 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 GRSF1Q12849 480 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZNF155Q12901 538 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CRYMQ14894 314 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CTF1Q16619 201 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 KIF19Q2TAC6 998 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZNF324BQ6AW86 544 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 MZT2BQ6NZ67 158 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 TMEM154Q6P9G4 183 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 KLHL35Q6PF15 583 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 SLC36A4Q6YBV0 504 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 C16orf82Q7Z2V1 217 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 TSPAN33Q86UF1 283 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CSNK2A3Q8NEV1 391 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 SPATA22Q8NHS9 363 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 PGAM5Q96HS1 289 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 OR1F2PQ96R84 312 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 DDX31Q9H8H2 851 aaKnown RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 PLEKHA5Q9HAU0 1116 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 RRP7BPQ9NSQ0 103 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 ACSS1Q9NUB1 689 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 CWC15Q9P013 229 aaKnown RBP3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 PNMA2Q9UL42 364 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 SNX9Q9Y5X1 595 aa3.8□□□□□ -1.8
HMGB1P11-201ENST00000413899 MAGEA13PA6NCF6 341 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 MYO1GB0I1T2 1018 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 BTBD18B2RXH4 712 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 ACOT8O14734 319 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 KDM4BO94953 1096 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 PMS2P2O95744 297 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 LINC00271P0C7V0 271 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 RARGP13631 454 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 BDKRB2P30411 391 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 HOXA13P31271 388 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 CLCN3P51790 818 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 NAP1L1P55209 391 aaKnown RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 TAS2R40P59535 323 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 AIMP2Q13155 320 aaKnown RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 TNFAIP1Q13829 316 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 ASIC2Q16515 512 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 DECR1Q16698 335 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms