RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SYCE1Q8N0S2 351 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 ZNF567Q8N184 647 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 ACTL9Q8TC94 416 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 IFI44Q8TCB0 444 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 HTR3CQ8WXA8 447 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 SCG3Q8WXD2 468 aaKnown RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 AGAP2Q99490 1192 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 FAM118BQ9BPY3 351 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 SUDS3Q9H7L9 328 aaPredicted RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 EVA1BQ9NVM1 165 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 NCKIPSDQ9NZQ3 722 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 KLHL8Q9P2G9 620 aaPredicted RBP14.77□□□□□ -0.05
LIMS4-201ENST00000413601 ADGRG1Q9Y653 693 aa14.77□□□□□ -0.05
LIMS4-201ENST00000413601 FUCA1P04066 466 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CEACAM5P06731 702 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 TEAD1P28347 426 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 RBL1P28749 1068 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CETN2P41208 172 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 POLD2P49005 469 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 SPINT3P49223 89 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CAMK2BQ13554 666 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 NR0B2Q15466 257 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 SLC14A2Q15849 920 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 LVRNQ6Q4G3 990 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 ZNF765Q7L2R6 523 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 EFL1Q7Z2Z2 1120 aaKnown RBP14.76□□□□□ -0.05
LIMS4-201ENST00000413601 NRSN1Q8IZ57 195 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 SDR16C5Q8N3Y7 309 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 UBL4BQ8N7F7 174 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 KDF1Q8NAX2 398 aaPredicted RBP14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CCL4L1Q8NHW4 92 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CCHCR1Q8TD31 782 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 PTCD2Q8WV60 388 aaKnown RBP14.76□□□□□ -0.05
LIMS4-201ENST00000413601 GLMNQ92990 594 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 EID2BQ96D98 161 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 WDR24Q96S15 920 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 VAT1Q99536 393 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 FRMD8Q9BZ67 464 aaPredicted RBP14.76□□□□□ -0.05
LIMS4-201ENST00000413601 TMEM168Q9H0V1 697 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 SIRPGQ9P1W8 387 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 GULP1Q9UBP9 304 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 GPR34Q9UPC5 381 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 SHOC2Q9UQ13 582 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CAPN6Q9Y6Q1 641 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 CEP295Q9C0D2 2601 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 KNTC1P50748 2209 aa14.76□□□□□ -0.05
LIMS4-201ENST00000413601 EME2A4GXA9 379 aaPredicted RBP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TMEM8BA6NDV4 472 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TRABD2BA6NFA1 517 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 MIF4GDA9UHW6 222 aaKnown RBP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 INPP4BO15327 924 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 DDX3YO15523 660 aaKnown RBP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 OPA1O60313 960 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TJP3O95049 919 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 NDST3O95803 873 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 GP1BAP07359 652 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 RPIAP49247 311 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 EIF3EP60228 445 aaKnown RBP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TARDBPQ13148 414 aaKnown RBP eCLIP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 PERM1Q5SV97 790 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 CCDC70Q6NSX1 233 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 DOK6Q6PKX4 331 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 KDELC1Q6UW63 502 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 ADAMTSL4Q6UY14 1074 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TAF8Q7Z7C8 310 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TRIM74Q86UV6 250 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 NLRP8Q86W28 1048 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 KYQ8NBH2 561 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 ZCCHC14Q8WYQ9 949 aaKnown RBP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 HIC2Q96JB3 615 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 ABCG4Q9H172 646 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 CARS2Q9HA77 564 aaKnown RBP14.75□□□□□ -0.05
LIMS4-201ENST00000413601 ZFYVE1Q9HBF4 777 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 MAGEE1Q9HCI5 957 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 PKD2L2Q9NZM6 624 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 FAM153AQ9UHL3 310 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 ZMIZ1Q9ULJ6 1067 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 PADI4Q9UM07 663 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 GUCA1BQ9UMX6 200 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 TMEM98Q9Y2Y6 226 aa14.75□□□□□ -0.05
LIMS4-201ENST00000413601 ARHGAP6O43182 974 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 SLC4A1P02730 911 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 CAPNS1P04632 268 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 PYGLP06737 847 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 RBP3P10745 1247 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 GNPDA1P46926 289 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 WNT3AP56704 352 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
LIMS4-201ENST00000413601 RAVER1Q8IY67 606 aaKnown RBP14.74□□□□□ -0.05
LIMS4-201ENST00000413601 RNF10Q8N5U6 811 aaKnown RBP14.74□□□□□ -0.05
LIMS4-201ENST00000413601 PDCD7Q8N8D1 485 aaKnown RBP14.74□□□□□ -0.05
LIMS4-201ENST00000413601 ARL10Q8N8L6 244 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 FAM46DQ8NEK8 389 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 MDM1Q8TC05 714 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 MAPK15Q8TD08 544 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 OXNAD1Q96HP4 312 aaPredicted RBP14.74□□□□□ -0.05
LIMS4-201ENST00000413601 HES6Q96HZ4 224 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 FCRL5Q96RD9 977 aa14.74□□□□□ -0.05
LIMS4-201ENST00000413601 GPR63Q9BZJ6 419 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms