RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 FASLGP48023 281 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 CSNK1DP48730 415 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 CDK3Q00526 305 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 MC2RQ01718 297 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 NR1I3Q14994 352 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 ACOX1Q15067 660 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 KRT31Q15323 416 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 CNGA3Q16281 694 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 VWA3BQ502W6 1294 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 TCTN3Q6NUS6 607 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 C16orf46Q6P387 395 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 CEACAM20Q6UY09 585 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 APTXQ7Z2E3 356 aaKnown RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 ARHGAP22Q7Z5H3 698 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 SLFN11Q7Z7L1 901 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 SRLQ86TD4 932 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 ZNF761Q86XN6 746 aaPredicted RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 TEX19Q8NA77 164 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 TSEN2Q8NCE0 465 aaKnown RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 SLC37A2Q8TED4 501 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 SLC20A1Q8WUM9 679 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 NSMCE3Q96MG7 304 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 C11orf70Q9BRQ4 267 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 ZPBPQ9BS86 351 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 NDST4Q9H3R1 872 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 APMAPQ9HDC9 416 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 TAB2Q9NYJ8 693 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 B4GALT6Q9UBX8 382 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 NOCTQ9UK39 431 aaKnown RBP9.53□□□□□ -0.88
RFFL-203ENST00000413582 SLC17A4Q9Y2C5 497 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 KCTD3Q9Y597 815 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 C2CD3Q4AC94 2353 aa9.53□□□□□ -0.88
RFFL-203ENST00000413582 CELSR2Q9HCU4 2923 aa9.52□□□□□ -0.88
RFFL-203ENST00000413582 A8MX80 341 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 F8VZ95 297 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 MKRN2OSH3BPM6 223 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 FGF10O15520 208 aaPredicted RBP9.52□□□□□ -0.89
RFFL-203ENST00000413582 CREB3O43889 395 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 IVLP07476 585 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 F8A1P23610 371 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 MAN1A1P33908 653 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 ACTR1BP42025 376 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 ZNF75DP51815 510 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 COPB1P53618 953 aaKnown RBP9.52□□□□□ -0.89
RFFL-203ENST00000413582 ACTR1AP61163 376 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 BCL2L1Q07817 233 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 PTP4A2Q12974 167 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 PEX6Q13608 980 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 MAP7Q14244 749 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 SNAP47Q5SQN1 464 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 FHL5Q5TD97 284 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 ASB18Q6ZVZ8 466 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 KDELC2Q7Z4H8 507 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 CCDC13Q8IYE1 715 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 ESX1Q8N693 406 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 GALNT11Q8NCW6 608 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 OR10G6Q8NH81 332 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 SSC4DQ8WTU2 575 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 DTD2Q96FN9 168 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 SCARF2Q96GP6 870 aaPredicted RBP9.52□□□□□ -0.89
RFFL-203ENST00000413582 PDLIM2Q96JY6 352 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 OR2M4Q96R27 311 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 NAA15Q9BXJ9 866 aaKnown RBP9.52□□□□□ -0.89
RFFL-203ENST00000413582 TRIT1Q9H3H1 467 aaKnown RBP9.52□□□□□ -0.89
RFFL-203ENST00000413582 CATSPERBQ9H7T0 1116 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 PRDM8Q9NQV8 689 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 FBXO8Q9NRD0 319 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 SIDT1Q9NXL6 827 aaKnown RBP9.52□□□□□ -0.89
RFFL-203ENST00000413582 IFNKQ9P0W0 207 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 PLEKHM1Q9Y4G2 1056 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 RPS6KL1Q9Y6S9 549 aa9.52□□□□□ -0.89
RFFL-203ENST00000413582 A8MU76 341 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 LGALS16A8MUM7 142 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 SEMA7AO75326 666 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 VPS4BO75351 444 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 RFPL1O75677 317 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 PALMO75781 387 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 HEXIM1O94992 359 aaKnown RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 PDGFAP04085 211 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 FURINP09958 794 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 LHCGRP22888 699 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 TEAD1P28347 426 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 RFC1P35251 1148 aaPredicted RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 ETV3P41162 512 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 POLD2P49005 469 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 PMS2P54278 862 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 GSCP56915 257 aaPredicted RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 FMO1Q01740 532 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 KLHDC7AQ5VTJ3 777 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 DOK6Q6PKX4 331 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 WDR74Q6RFH5 385 aaPredicted RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 SFRP1Q8N474 314 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 SLC30A5Q8TAD4 765 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 IQCDQ96DY2 449 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 AHCYL2Q96HN2 611 aaKnown RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 CELF6Q96J87 481 aaKnown RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 NAP1L5Q96NT1 182 aaPredicted RBP9.51□□□□□ -0.89
RFFL-203ENST00000413582 SLC38A3Q99624 504 aa9.51□□□□□ -0.89
RFFL-203ENST00000413582 CINPQ9BW66 212 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms