RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 TRIM74Q86UV6 250 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 NAGSQ8N159 534 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 BBS5Q8N3I7 341 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 NUDT22Q9BRQ3 303 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 GSDMCQ9BYG8 508 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 WDR70Q9NW82 654 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.16■□□□□ 0.66
CPSF7-204ENST00000413232 FOXJ2Q9P0K8 574 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 CAPN11Q9UMQ6 739 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 NENFQ9UMX5 172 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 TMEM98Q9Y2Y6 226 aa19.16■□□□□ 0.66
CPSF7-204ENST00000413232 BZW2Q9Y6E2 419 aaKnown RBP19.16■□□□□ 0.66
CPSF7-204ENST00000413232 SYCE3A1L190 88 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 C9orf172C9J069 976 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 PPM1DO15297 605 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 NVLO15381 856 aaKnown RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 PRLP01236 227 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 TEAD1P28347 426 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 ALDH4A1P30038 563 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 GARSP41250 739 aaKnown RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 UBASH3AP57075 661 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 TAS2R40P59535 323 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 ZBED6P86452 979 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 DPTQ07507 201 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 ITKQ08881 620 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 GALNT2Q10471 571 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 PAFAH1B3Q15102 231 aaKnown RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 NFKBIBQ15653 356 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 PHF19Q5T6S3 580 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 ALKBH5Q6P6C2 394 aaKnown RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 DOK6Q6PKX4 331 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 ZFAND4Q86XD8 727 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 NSMCE1Q8WV22 266 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 MAML1Q92585 1016 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 USP7Q93009 1102 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 SCARF2Q96GP6 870 aaPredicted RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 KCTD5Q9NXV2 234 aa19.15■□□□□ 0.66
CPSF7-204ENST00000413232 RCOR3Q9P2K3 495 aaPredicted RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 PCYT1BQ9Y5K3 369 aaPredicted RBP19.15■□□□□ 0.66
CPSF7-204ENST00000413232 A0A0J9YYE9 177 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 MYO1FO00160 1098 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 TRBC1P01850 177 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 GYPCP04921 128 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 IVLP07476 585 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 CCL4P13236 92 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 CD1CP29017 333 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 GJC1P36383 396 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 SSR1P43307 286 aaKnown RBP19.14■□□□□ 0.65
CPSF7-204ENST00000413232 GPR1P46091 355 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 MAPK10P53779 464 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 NIPAL4Q0D2K0 466 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 ILF3Q12906 894 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■■□ 21.5
CPSF7-204ENST00000413232 SLC10A2Q12908 348 aaPredicted RBP19.14■□□□□ 0.65
CPSF7-204ENST00000413232 NR1D2Q14995 579 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 CCDC122Q5T0U0 273 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 ALG1LQ6GMV1 187 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 USP45Q70EL2 814 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 RCBTB1Q8NDN9 531 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 ARRDC2Q8TBH0 407 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 CHKBQ9Y259 395 aa19.14■□□□□ 0.65
CPSF7-204ENST00000413232 CPNE6O95741 557 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 WT1P19544 449 aaPredicted RBP19.13■□□□□ 0.65
CPSF7-204ENST00000413232 ARSDP51689 593 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 MAP9Q49MG5 647 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 ANKRD20A8PQ5CZ79 823 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 NKAIN2Q5VXU1 208 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 PIM3Q86V86 326 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 LRRC49Q8IUZ0 686 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 PQLC3Q8N755 202 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 ZNF564Q8TBZ8 553 aaPredicted RBP19.13■□□□□ 0.65
CPSF7-204ENST00000413232 PMEPA1Q969W9 287 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 AP2M1Q96CW1 435 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 WDR24Q96S15 920 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 CMKLR1Q99788 373 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 PACSIN1Q9BY11 444 aa19.13■□□□□ 0.65
CPSF7-204ENST00000413232 POLR1EQ9GZS1 481 aaKnown RBP19.13■□□□□ 0.65
CPSF7-204ENST00000413232 RBM22Q9NW64 420 aaKnown RBP eCLIP19.13■□□□□ 0.651e-6■■■■□ 23.9
CPSF7-204ENST00000413232 IGHV5-10-1A0A0J9YXX1 117 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 RHPN2P1A8MT19 583 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 MATN3O15232 486 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 CLDN7O95471 211 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 EML2O95834 649 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 HLA-DQB2P05538 268 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 STC1P52823 247 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 GBE1Q04446 702 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 LINC00303Q3SY05 128 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 PYCR3Q53H96 274 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 ADAMTSL4Q6UY14 1074 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 MARK2Q7KZI7 788 aaKnown RBP19.12■□□□□ 0.65
CPSF7-204ENST00000413232 VASH2Q86V25 355 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 EXD3Q8N9H8 876 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 COX14Q96I36 57 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 TSGA13Q96PP4 275 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 TDRD1Q9BXT4 1180 aaKnown RBP19.12■□□□□ 0.65
CPSF7-204ENST00000413232 BSNQ9UPA5 3926 aa19.12■□□□□ 0.65
CPSF7-204ENST00000413232 TRBV23OR9-2A0A075B6M9 112 aa19.11■□□□□ 0.65
CPSF7-204ENST00000413232 INPP4BO15327 924 aa19.11■□□□□ 0.65
CPSF7-204ENST00000413232 LIPCP11150 499 aa19.11■□□□□ 0.65
CPSF7-204ENST00000413232 NFKBIAP25963 317 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms