RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
SSB-203ENST00000413002 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ANKRD20A2Q5SQ80 823 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ANKRD20A1Q5TYW2 823 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ANKRD20A3Q5VUR7 823 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 SFTPA2Q8IWL1 248 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 CCL4L1Q8NHW4 92 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 BTN2A2Q8WVV5 523 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ATG4AQ8WYN0 398 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 MRGPRX2Q96LB1 330 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 FCRL5Q96RD9 977 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 LYSMD1Q96S90 227 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 VAT1Q99536 393 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 TEX101Q9BY14 249 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 TMEM168Q9H0V1 697 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ZFYVE1Q9HBF4 777 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ARFGAP3Q9NP61 516 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 PHPT1Q9NRX4 125 aaPredicted RBP13.1□□□□□ -0.31
SSB-203ENST00000413002 SIRPGQ9P1W8 387 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 U3KQA8 63 aa13.1□□□□□ -0.31
SSB-203ENST00000413002 ARID1BQ8NFD5 2236 aaPredicted RBP13.09□□□□□ -0.31
SSB-203ENST00000413002 CPED1A4D0V7 1026 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 C1QTNF9BB2RNN3 333 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 CASC3O15234 703 aaKnown RBP13.09□□□□□ -0.31
SSB-203ENST00000413002 BUD23O43709 281 aaKnown RBP13.09□□□□□ -0.31
SSB-203ENST00000413002 RFPL3O75679 317 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 DKK1O94907 266 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 AGTP01019 485 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 CEACAM5P06731 702 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 C1QTNF9P0C862 333 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 PSMB4P28070 264 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 SPINT3P49223 89 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 DPTQ07507 201 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 SIRPB2Q5JXA9 342 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 MARK2Q7KZI7 788 aaKnown RBP13.09□□□□□ -0.31
SSB-203ENST00000413002 APOL2Q9BQE5 337 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 FICDQ9BVA6 458 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 GPR63Q9BZJ6 419 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 CARS2Q9HA77 564 aaKnown RBP13.09□□□□□ -0.31
SSB-203ENST00000413002 BPIFA1Q9NP55 256 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 TRHDEQ9UKU6 1024 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 CSNK1G3Q9Y6M4 447 aa13.09□□□□□ -0.31
SSB-203ENST00000413002 LOC285095A0A1B0GVY8 99 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 PRSS38A1L453 326 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 FADS2P1A8MWK0 482 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 LMO7DNF2Z398 122 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 HOXC4P09017 264 aaPredicted RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 CKMT1AP12532 417 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 KELP23276 732 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 GNPDA1P46926 289 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 BLKP51451 505 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 GDF10P55107 478 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 ELOCQ15369 112 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 SLC14A2Q15849 920 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 KCTD19Q17RG1 926 aaPredicted RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 ZNF648Q5T619 568 aaPredicted RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 SEL1L2Q5TEA6 688 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 ZCCHC8Q6NZY4 707 aaKnown RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 GUSBP11Q6P575 273 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 TMC3Q7Z5M5 1100 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 TAF8Q7Z7C8 310 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 SLC35F3Q8IY50 421 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 NRSN1Q8IZ57 195 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 GPR26Q8NDV2 337 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 ATL2Q8NHH9 583 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 CCHCR1Q8TD31 782 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 C1orf54Q8WWF1 131 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 SPATA13Q96N96 652 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 DUSP23Q9BVJ7 150 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 FRMD8Q9BZ67 464 aaPredicted RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 GBA3Q9H227 469 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 MAGEE1Q9HCI5 957 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 PKD2L2Q9NZM6 624 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 DNPEPQ9ULA0 475 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 SUFUQ9UMX1 484 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 PLEKHM1Q9Y4G2 1056 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 ACACBO00763 2458 aa13.08□□□□□ -0.32
SSB-203ENST00000413002 TPRP12270 2363 aaKnown RBP13.08□□□□□ -0.32
SSB-203ENST00000413002 PDE2AO00408 941 aaPredicted RBP13.07□□□□□ -0.32
SSB-203ENST00000413002 TNFRSF10CO14798 259 aa13.07□□□□□ -0.32
SSB-203ENST00000413002 NRDCO43847 1150 aa13.07□□□□□ -0.32
SSB-203ENST00000413002 USP12O75317 370 aa13.07□□□□□ -0.32
SSB-203ENST00000413002 STK10O94804 968 aaKnown RBP13.07□□□□□ -0.32
SSB-203ENST00000413002 ASMTLO95671 621 aa13.07□□□□□ -0.32
SSB-203ENST00000413002 ACP1P24666 158 aa13.07□□□□□ -0.32
SSB-203ENST00000413002 MPP3Q13368 585 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms