RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FAM118BQ9BPY3 351 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 GUCA1BQ9UMX6 200 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 DOLKQ9UPQ8 538 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 DGKBQ9Y6T7 804 aa18.79■□□□□ 0.6
TRIM56-202ENST00000412507 ARHGAP6O43182 974 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 SOD1P00441 154 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 PROS1P07225 676 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 PIRTP0C851 137 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 TEAD1P28347 426 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 DUSP3P51452 185 aaPredicted RBP18.78■□□□□ 0.6
TRIM56-202ENST00000412507 C6orf132Q5T0Z8 1188 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 ZNF765Q7L2R6 523 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 LYSMD3Q7Z3D4 306 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 TMPRSS12Q86WS5 348 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 GKN2Q86XP6 184 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 NRSN1Q8IZ57 195 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 CCDC112Q8NEF3 446 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 VAT1Q99536 393 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 RIOK2Q9BVS4 552 aaKnown RBP18.78■□□□□ 0.6
TRIM56-202ENST00000412507 BOCQ9BWV1 1114 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 FAM153AQ9UHL3 310 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 ASPMQ8IZT6 3477 aa18.78■□□□□ 0.6
TRIM56-202ENST00000412507 KMT2BQ9UMN6 2715 aaPredicted RBP18.78■□□□□ 0.6
TRIM56-202ENST00000412507 PRSS38A1L453 326 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 CPED1A4D0V7 1026 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 KRT86O43790 486 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 TJP3O95049 919 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 CEACAM5P06731 702 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 RBP3P10745 1247 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 SPINT3P49223 89 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 EIF3EP60228 445 aaKnown RBP18.77■□□□□ 0.6
TRIM56-202ENST00000412507 HES3Q5TGS1 186 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 KDELC1Q6UW63 502 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 NLRP8Q86W28 1048 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 LRRC8AQ8IWT6 810 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 SLC35F3Q8IY50 421 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 IFI44Q8TCB0 444 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 CCHCR1Q8TD31 782 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 SCG3Q8WXD2 468 aaKnown RBP18.77■□□□□ 0.6
TRIM56-202ENST00000412507 GLMNQ92990 594 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 HES6Q96HZ4 224 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 FCRL5Q96RD9 977 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 WDR24Q96S15 920 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 FRMD8Q9BZ67 464 aaPredicted RBP18.77■□□□□ 0.6
TRIM56-202ENST00000412507 TSGA10Q9BZW7 698 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 TMEM168Q9H0V1 697 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 SUDS3Q9H7L9 328 aaPredicted RBP18.77■□□□□ 0.6
TRIM56-202ENST00000412507 USP29Q9HBJ7 922 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 EVA1BQ9NVM1 165 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 PKD2L2Q9NZM6 624 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
TRIM56-202ENST00000412507 ZNF106Q9H2Y7 1883 aaKnown RBP18.77■□□□□ 0.6
TRIM56-202ENST00000412507 CACNA1BQ00975 2339 aa18.77■□□□□ 0.59
TRIM56-202ENST00000412507 WDFY3Q8IZQ1 3526 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 NDST3O95803 873 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 FUCA1P04066 466 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 JUPP14923 745 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 POLD2P49005 469 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 WNT3AP56704 352 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 E2F1Q01094 437 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 INSM1Q01101 510 aaPredicted RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 NR0B2Q15466 257 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 CCDC70Q6NSX1 233 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 GUSBP11Q6P575 273 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 DARS2Q6PI48 645 aaKnown RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 DOK6Q6PKX4 331 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 ADAMTSL4Q6UY14 1074 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 TRIM74Q86UV6 250 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 CDKL3Q8IVW4 592 aaPredicted RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 RAVER1Q8IY67 606 aaKnown RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 SDR16C5Q8N3Y7 309 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 CCL4L1Q8NHW4 92 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 PTCD2Q8WV60 388 aaKnown RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 EID2BQ96D98 161 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 OXNAD1Q96HP4 312 aaPredicted RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 FAM83DQ9H4H8 585 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 CARS2Q9HA77 564 aaKnown RBP18.76■□□□□ 0.59
TRIM56-202ENST00000412507 ZFYVE1Q9HBF4 777 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 MAGEE1Q9HCI5 957 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 NCKIPSDQ9NZQ3 722 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 SIRPGQ9P1W8 387 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 GULP1Q9UBP9 304 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 RSPH14Q9UHP6 348 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 TRHDEQ9UKU6 1024 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 ZNF711Q9Y462 761 aa18.76■□□□□ 0.59
TRIM56-202ENST00000412507 EME2A4GXA9 379 aaPredicted RBP18.75■□□□□ 0.59
TRIM56-202ENST00000412507 INPP4BO15327 924 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 SLC4A1P02730 911 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 PTMAP06454 111 aaKnown RBP18.75■□□□□ 0.59
TRIM56-202ENST00000412507 PYGLP06737 847 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 ST3GAL2Q16842 350 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 LVRNQ6Q4G3 990 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 EFL1Q7Z2Z2 1120 aaKnown RBP18.75■□□□□ 0.59
TRIM56-202ENST00000412507 TAF8Q7Z7C8 310 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 HIC2Q96JB3 615 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 MRGPRX2Q96LB1 330 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 SUFUQ9UMX1 484 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 GPR34Q9UPC5 381 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 TMEM98Q9Y2Y6 226 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 SPO11Q9Y5K1 396 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms