RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 PRPSAP1Q14558 356 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 PAPD7Q5XG87 772 aaKnown RBP13.12□□□□□ -0.31
HDAC8-210ENST00000412342 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 TTC27Q6P3X3 843 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 ADAMTSL4Q6UY14 1074 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 HEATR4Q86WZ0 1026 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 GPR26Q8NDV2 337 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 OR1E3Q8WZA6 343 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 COX14Q96I36 57 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 WDR92Q96MX6 357 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 SRPK1Q96SB4 655 aaKnown RBP13.12□□□□□ -0.31
HDAC8-210ENST00000412342 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
HDAC8-210ENST00000412342 FSD1LQ9BXM9 530 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 WDR26Q9H7D7 661 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 PKD2L2Q9NZM6 624 aa13.12□□□□□ -0.31
HDAC8-210ENST00000412342 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
HDAC8-210ENST00000412342 FADS2P1A8MWK0 482 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 CACNB4O00305 520 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 AP2A1O95782 977 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 IFNB1P01574 187 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 FUCA1P04066 466 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 ZSCAN5DPP0CG00 497 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 CEACAM1P13688 526 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 BPIP17213 487 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 JUNDP17535 347 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 RPL22P35268 128 aaKnown RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 HMGCLP35914 325 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 GRK6P43250 576 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 HNRNPKP61978 463 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 SEMA5AQ13591 1074 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PPM1JQ5JR12 505 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 RAET1GQ6H3X3 334 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PSAPL1Q6NUJ1 521 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 ENPP7Q6UWV6 458 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 DGLUCYQ7Z3D6 616 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PHACTR4Q8IZ21 702 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 ZNF548Q8NEK5 533 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 CCHCR1Q8TD31 782 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 TSACCQ96A04 125 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 PDXPQ96GD0 296 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 TBATAQ96M53 351 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 TBL1YQ9BQ87 522 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 FRMD8Q9BZ67 464 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-210ENST00000412342 GPR63Q9BZJ6 419 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 ETNK1Q9HBU6 452 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 HACD3Q9P035 362 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 IL17CQ9P0M4 197 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 DGKBQ9Y6T7 804 aa13.11□□□□□ -0.31
HDAC8-210ENST00000412342 TRIM38O00635 465 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 TNFRSF10CO14798 259 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 SUN1O94901 812 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 SLC4A1P02730 911 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 CEACAM5P06731 702 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 PYGLP06737 847 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 TCP1P17987 556 aaKnown RBP13.1□□□□□ -0.31
HDAC8-210ENST00000412342 HTR1BP28222 390 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 GPR1P46091 355 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 HK3P52790 923 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 KCTD19Q17RG1 926 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-210ENST00000412342 GLRX5Q86SX6 157 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 OR56A4Q8NGH8 313 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 BLOC1S5Q8TDH9 187 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 RHBDD1Q8TEB9 315 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 SETD7Q8WTS6 366 aaKnown RBP13.1□□□□□ -0.31
HDAC8-210ENST00000412342 PLEKHG4BQ96PX9 1271 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 AP1M1Q9BXS5 423 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 CLPBQ9H078 707 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 CDH19Q9H159 772 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 SLC32A1Q9H598 525 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 LRRC40Q9H9A6 602 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 MRPL40Q9NQ50 206 aaKnown RBP13.1□□□□□ -0.31
HDAC8-210ENST00000412342 PHPT1Q9NRX4 125 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-210ENST00000412342 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 TOR4AQ9NXH8 423 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 PAK5Q9P286 719 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 KLQ9UEF7 1012 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
HDAC8-210ENST00000412342 SLC17A4Q9Y2C5 497 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 NEU2Q9Y3R4 380 aa13.1□□□□□ -0.31
HDAC8-210ENST00000412342 BPTFQ12830 3046 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 GOLGA6CA6NDK9 693 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 GOLGA6BA6NDN3 693 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 H3BM21 787 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 DKK1O94907 266 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 RASGRP1O95267 797 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 CELA2BP08218 269 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms