RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 MTG2Q9H4K7 406 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 CAB39LQ9H9S4 337 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 CD320Q9NPF0 282 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 MARCH4Q9P2E8 410 aaPredicted RBP11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 SLC17A7Q9P2U7 560 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 THAP10Q9P2Z0 257 aaPredicted RBP11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 DKK3Q9UBP4 350 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 APPL1Q9UKG1 709 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 GRID1Q9ULK0 1009 aa11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 FNDC3AQ9Y2H6 1198 aaKnown RBP11.6□□□□□ -0.55
SNRNP35-202ENST00000412157 UBA6A0AVT1 1052 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 C2CD4DB7Z1M9 353 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 KPNA3O00505 521 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 NPC1O15118 1278 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 ASMTLO95671 621 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 EPHX1P07099 455 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 CTSLP07711 333 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 IL9P15248 144 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 GABRB3P28472 473 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 CRABP2P29373 138 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 VIPR1P32241 457 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 TNFRSF4P43489 277 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 TTPAP49638 278 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 KPNA2P52292 529 aaKnown RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 PTPN5P54829 565 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 RAB10P61026 200 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 CACNG1Q06432 222 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 PDE1CQ14123 709 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 ZDHHC20Q5W0Z9 365 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 LRRC66Q68CR7 880 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 NAIF1Q69YI7 327 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 PTCRAQ6ISU1 281 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 ERAP2Q6P179 960 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 CRTC1Q6UUV9 634 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 KYAT3Q6YP21 454 aaKnown RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 MICALCLQ6ZW33 695 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 TAS2R42Q7RTR8 314 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 LDB1Q86U70 411 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 LCA5Q86VQ0 697 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 TRIM42Q8IWZ5 723 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 CBARPQ8N350 705 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 TMIEQ8NEW7 156 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 MAGEB18Q96M61 343 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 FAM111AQ96PZ2 611 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 EPN3Q9H201 632 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 TMEM245Q9H330 911 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 DYRK4Q9NR20 520 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 RAD18Q9NS91 495 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 PKD2L2Q9NZM6 624 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 B4GALT6Q9UBX8 382 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 MID2Q9UJV3 735 aa11.59□□□□□ -0.55
SNRNP35-202ENST00000412157 BRWD1Q9NSI6 2320 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 A0A087X1B8 175 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 GLYATL1P3A0A0U1RQE8 302 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 A8MX80 341 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 PRR33A8MZF0 331 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 SPECC1L-ADORA2AF8WAN1 911 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 PHGDHO43175 533 aaKnown RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 SRP72O76094 671 aaKnown RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 S1PR4O95977 384 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 C2P06681 752 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 VIMP08670 466 aaKnown RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 HNRNPLP14866 589 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 IL12RB1P42701 662 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 SOX9P48436 509 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 PEX6Q13608 980 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 SEMA3AQ14563 771 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 CDKN3Q16667 212 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 LEXMQ3ZCV2 418 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 CCDC153Q494R4 210 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 ZNF789Q5FWF6 425 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 RBM20Q5T481 1227 aaKnown RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 C9orf64Q5T6V5 341 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 N4BP2L1Q5TBK1 243 aaPredicted RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 HECTD2Q5U5R9 776 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 LYPLAL1Q5VWZ2 237 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 EGFLAMQ63HQ2 1017 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 FAM151BQ6UXP7 276 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 CERS6Q6ZMG9 384 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 DPPA4Q7L190 304 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 SNX20Q7Z614 316 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 CCDC91Q7Z6B0 441 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 TBC1D1Q86TI0 1168 aaPredicted RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 TSPAN33Q86UF1 283 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 SFTPA1Q8IWL2 248 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 PIP4K2CQ8TBX8 421 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 LRRC8CQ8TDW0 803 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 DNASE1L2Q92874 299 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 VOPP1Q96AW1 172 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 CHMP6Q96FZ7 201 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 NDNQ99608 321 aa11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 PHF7Q9BWX1 381 aaPredicted RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 C8orf33Q9H7E9 229 aaPredicted RBP11.58□□□□□ -0.56
SNRNP35-202ENST00000412157 TRPV5Q9NQA5 729 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms