RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 CCDC81Q6ZN84 652 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 ZNF605Q86T29 641 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 VASH2Q86V25 355 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 PQLC3Q8N755 202 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 EXD3Q8N9H8 876 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 RCBTB1Q8NDN9 531 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 OR6C4Q8NGE1 309 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 ARRDC2Q8TBH0 407 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 ZDHHC1Q8WTX9 485 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 MAML1Q92585 1016 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 USP7Q93009 1102 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 WBP1Q96G27 269 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 SCARF2Q96GP6 870 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 TMEM74Q96NL1 305 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 CCNL2Q96S94 520 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 PHPT1Q9NRX4 125 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 WDR70Q9NW82 654 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 TMEM9Q9P0T7 183 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 IP6K2Q9UHH9 426 aa16.45■□□□□ 0.22
SCAMP4-203ENST00000411971 SYCE3A1L190 88 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 GOLGA6CA6NDK9 693 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 GOLGA6BA6NDN3 693 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 GOLGA6DP0CG33 693 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 CD1CP29017 333 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 CSF2RBP32927 897 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 GARSP41250 739 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 GALNT2Q10471 571 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 EIF3IQ13347 325 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 ARHGEF7Q14155 803 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 PAFAH1B3Q15102 231 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 ALG1LQ6GMV1 187 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 ZNF761Q86XN6 746 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 STRADBQ9C0K7 418 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 TRNAU1APQ9NX07 287 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 GOLGA6AQ9NYA3 693 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 CHKBQ9Y259 395 aa16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 OAS3Q9Y6K5 1087 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-203ENST00000411971 IGHV5-10-1A0A0J9YXX1 117 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 A0A0J9YYE9 177 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 PSMD11O00231 422 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 NVLO15381 856 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 TRBC1P01850 177 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 SERPING1P05155 500 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 HLA-DQB2P05538 268 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 IVLP07476 585 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 JMJD7P0C870 316 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 CYP2A6P11509 494 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 MPSTP25325 297 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 TEAD1P28347 426 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 ALDH4A1P30038 563 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 MAPK10P53779 464 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 GBE1Q04446 702 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 DPTQ07507 201 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 KRT81Q14533 505 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 PHF19Q5T6S3 580 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 ALKBH5Q6P6C2 394 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 MARK2Q7KZI7 788 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 CCDC97Q96F63 343 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 CNOT6Q9ULM6 557 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 PRKAB1Q9Y478 270 aa16.43■□□□□ 0.22
SCAMP4-203ENST00000411971 TRBV23OR9-2A0A075B6M9 112 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 A0A1W2PQ67 120 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 INPP4BO15327 924 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 CLDN7O95471 211 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 MMP2P08253 660 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 GPR1P46091 355 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 STC1P52823 247 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 ZBED6P86452 979 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 ITKQ08881 620 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 ILF3Q12906 894 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 MAP9Q49MG5 647 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 PYCR3Q53H96 274 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 ANKRD20A8PQ5CZ79 823 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 RALGPS1Q5JS13 557 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 ADAMTSL4Q6UY14 1074 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 USP45Q70EL2 814 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 DTX1Q86Y01 620 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 ZNF564Q8TBZ8 553 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 KIAA1524Q8TCG1 905 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 HTR3CQ8WXA8 447 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 JPH3Q8WXH2 748 aaPredicted RBP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 AP2M1Q96CW1 435 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 COX14Q96I36 57 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 CCDC74BQ96LY2 380 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 RIOK2Q9BVS4 552 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 TDRD1Q9BXT4 1180 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 GSDMCQ9BYG8 508 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 BRD8Q9H0E9 1235 aa16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.42■□□□□ 0.22
SCAMP4-203ENST00000411971 MYO18BQ8IUG5 2567 aa16.41■□□□□ 0.22
SCAMP4-203ENST00000411971 TMX2-CTNND1H3BSU7 103 aa16.41■□□□□ 0.22
SCAMP4-203ENST00000411971 PDE2AO00408 941 aaPredicted RBP16.41■□□□□ 0.22
SCAMP4-203ENST00000411971 MATN3O15232 486 aa16.41■□□□□ 0.22
SCAMP4-203ENST00000411971 CPNE6O95741 557 aa16.41■□□□□ 0.22
SCAMP4-203ENST00000411971 ATP1A1P05023 1023 aaKnown RBP16.41■□□□□ 0.22
SCAMP4-203ENST00000411971 LIPCP11150 499 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms