RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 DENND5AQ6IQ26 1287 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 GLT6D1Q7Z4J2 308 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 TTC30BQ8N4P2 665 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 LRRC45Q96CN5 670 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 CAPZA3Q96KX2 299 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 TEX101Q9BY14 249 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 TCEAL2Q9H3H9 227 aaPredicted RBP23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 FAM83DQ9H4H8 585 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 TRABDQ9H4I3 376 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 LRRC40Q9H9A6 602 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 BPIFA1Q9NP55 256 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 RAB6BQ9NRW1 208 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 PAK5Q9P286 719 aa23.76■■□□□ 1.39
UBE2E3-202ENST00000410062 RGSL1A5PLK6 1076 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 TMEM202A6NGA9 273 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 AP2A1O95782 977 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 NME1P15531 152 aaKnown RBP23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 JUNDP17535 347 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 KIAA1024LP59773 190 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 ALS2CLQ60I27 953 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 KCTD16Q68DU8 428 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 RBFAQ8N0V3 343 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 GPR26Q8NDV2 337 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 TSACCQ96A04 125 aaPredicted RBP23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 WDR92Q96MX6 357 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 UCKL1Q9NWZ5 548 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 HACD3Q9P035 362 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 SAR1BQ9Y6B6 198 aa23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 CNOT1A5YKK6 2376 aaKnown RBP23.75■■□□□ 1.39
UBE2E3-202ENST00000410062 FLRT2O43155 660 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 BUD23O43709 281 aaKnown RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PIAS2O75928 621 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 HOXC4P09017 264 aaPredicted RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 DGKAP23743 735 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 HMGCLP35914 325 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 FDFT1P37268 417 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 CDK3Q00526 305 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 CYP1B1Q16678 543 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 ALG11Q2TAA5 492 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 HENMT1Q5T8I9 393 aaKnown RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 KANSL1Q7Z3B3 1105 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 RD3Q7Z3Z2 195 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 NLRP8Q86W28 1048 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 ATL2Q8NHH9 583 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 RHBDD1Q8TEB9 315 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PHPT1Q9NRX4 125 aaPredicted RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PIH1D1Q9NWS0 290 aaKnown RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 KLQ9UEF7 1012 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 SCN8AQ9UQD0 1980 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PSMD3O43242 534 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 MYCLP1P12525 358 aaPredicted RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 BPIP17213 487 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 KCNA4P22459 653 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 TEAD1P28347 426 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 COILP38432 576 aaPredicted RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 HNRNPKP61978 463 aaKnown RBP eCLIP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PPARDQ03181 441 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 TRIP13Q15645 432 aaPredicted RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 ADAMTSL4Q6UY14 1074 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 HID1Q8IV36 788 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PHACTR4Q8IZ21 702 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 SLC25A45Q8N413 288 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 OR56A4Q8NGH8 313 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 ARNT2Q9HBZ2 717 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 MRPL40Q9NQ50 206 aaKnown RBP23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 PCOLCE2Q9UKZ9 415 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 ARL5AQ9Y689 179 aa23.74■■□□□ 1.39
UBE2E3-202ENST00000410062 FADS2P1A8MWK0 482 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 E7EVH7 732 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 H3BM21 787 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 GIPC1O14908 333 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 SCAMP1O15126 338 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 INPP4BO15327 924 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 CSRP1P21291 193 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 GRK6P43250 576 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 LMAN1P49257 510 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 SRP54P61011 504 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 MSLNQ13421 630 aaPredicted RBP23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 SEMA5AQ13591 1074 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 CCDC137Q6PK04 289 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 TRIM74Q86UV6 250 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 PDXPQ96GD0 296 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 SLC32A1Q9H598 525 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 FGF22Q9HCT0 170 aa23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 APOBEC3BQ9UH17 382 aaKnown RBP23.73■■□□□ 1.39
UBE2E3-202ENST00000410062 LRP4O75096 1905 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 GOLGA6L10A0A0M3HER8 536 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 PHF2O75151 1096 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 KCNK5O95279 499 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 TPH1P17752 444 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 KELP23276 732 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 NOVA1P51513 510 aaKnown RBP23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 DCDC1P59894 354 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 PTPRCAPQ14761 206 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 PSAPL1Q6NUJ1 521 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 CREG2Q8IUH2 290 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 ZNF548Q8NEK5 533 aaPredicted RBP23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 OR1E3Q8WZA6 343 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 SPATA16Q9BXB7 569 aa23.72■■□□□ 1.39
UBE2E3-202ENST00000410062 RAD18Q9NS91 495 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms