RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PAN2Q504Q3 1202 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 BLOC1S3Q6QNY0 202 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 LDB1Q86U70 411 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PIM3Q86V86 326 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PTRH1Q86Y79 214 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 TNIP2Q8NFZ5 429 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 OR52K2Q8NGK3 314 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 BRSK1Q8TDC3 778 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 CENPNQ96H22 339 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 MYRFLQ96LU7 910 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 TBATAQ96M53 351 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 KLHL5Q96PQ7 755 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 SLC39A3Q9BRY0 314 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 C9orf16Q9BUW7 83 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 TRIM54Q9BYV2 358 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 SYTL2Q9HCH5 934 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 MID1IP1Q9NPA3 183 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PCDHA9Q9Y5H5 950 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 GMEB1Q9Y692 573 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 DOCK4Q8N1I0 1966 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 A0A1B0GTW7 788 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 TYW5A2RUC4 315 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PIP5K1BO14986 540 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 RPP40O75818 363 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PRR35P0CG20 571 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 CAPN3P20807 821 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 FGFR3P22607 806 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 FASP25445 335 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PSMA4P25789 261 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 TYSND1Q2T9J0 566 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 TBCELQ5QJ74 424 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 DHRS4L2Q6PKH6 230 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 SPATA19Q7Z5L4 167 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 COLGALT2Q8IYK4 626 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PGBD5Q8N414 524 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 ATP6V0D2Q8N8Y2 350 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 GAB3Q8WWW8 586 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PSMG2Q969U7 264 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 KIAA1191Q96A73 305 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 LRRC58Q96CX6 371 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 PABPC5Q96DU9 382 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 FUBP3Q96I24 572 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 DNAJC1Q96KC8 554 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 C8orf48Q96LL4 319 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 AARSD1Q9BTE6 412 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 C1QTNF3Q9BXJ4 246 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 INTS10Q9NVR2 710 aaKnown RBP16.65■□□□□ 0.26
LIMS2-208ENST00000410011 CRYL1Q9Y2S2 319 aa16.65■□□□□ 0.26
LIMS2-208ENST00000410011 KANSL1LA0AUZ9 987 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 NR5A2O00482 541 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 KERAO60938 352 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 DUSP11O75319 330 aaKnown RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 GOT2P00505 430 aaKnown RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 TSPAN8P19075 237 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 YBEYP58557 167 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 YWHAHQ04917 246 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 LCP2Q13094 533 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 DCTN2Q13561 401 aaKnown RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 CCL14Q16627 93 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 VPS26BQ4G0F5 336 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 ALFQ53S48 1182 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 GDF6Q6KF10 455 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 SPRED1Q7Z699 444 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 PAPD5Q8NDF8 572 aaKnown RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 TRPV3Q8NET8 790 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 STAG3L4Q8TBR4 150 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 SH3RF2Q8TEC5 729 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 BTN2A3PQ96KV6 586 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 DERL2Q9GZP9 239 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 TUBB1Q9H4B7 451 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 CMTM6Q9NX76 183 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 IL37Q9NZH6 218 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 NUDT5Q9UKK9 219 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 GPR45Q9Y5Y3 372 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 UMPSP11172 480 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 CCT8P50990 548 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 OR4D1Q15615 310 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 SLC36A3Q495N2 470 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 ALG1LQ6GMV1 187 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 EFL1Q7Z2Z2 1120 aaKnown RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 TFAP2DQ7Z6R9 452 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 FAM47BQ8NA70 645 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF512Q96ME7 567 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 POLR1EQ9GZS1 481 aaKnown RBP16.64■□□□□ 0.25
LIMS2-208ENST00000410011 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 TRPM7Q96QT4 1865 aa16.64■□□□□ 0.25
LIMS2-208ENST00000410011 A0A1W2PP18 115 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 OR51F1A6NGY5 319 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 PLOD2O00469 737 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 CNTN5O94779 1100 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 AKR1A1P14550 325 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 STC1P52823 247 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 MERTKQ12866 999 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 SERINC3Q13530 473 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 GRB7Q14451 532 aa16.63■□□□□ 0.25
LIMS2-208ENST00000410011 ATP6AP1Q15904 470 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms