RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 ZSCAN18Q8TBC5 510 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 HERVK_113Q902F9 699 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TEKT5Q96M29 485 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 NMUR1Q9HB89 426 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 EIF2B3Q9NR50 452 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 KLHL3Q9UH77 587 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 YIPF1Q9Y548 306 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 COLEC10Q9Y6Z7 277 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 DYTNA2CJ06 578 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TRIM38O00635 465 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 IPO13O94829 963 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 HIST1H2ABP04908 130 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CD48P09326 243 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 EPHA3P29320 983 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 MRPS22P82650 360 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 TSTD2Q5T7W7 516 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CDC73Q6P1J9 531 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 HIST3H2AQ7L7L0 130 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 DNAJB7Q7Z6W7 309 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 AMIGO3Q86WK7 504 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 CAMK1DQ8IU85 385 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ZC3H7AQ8IWR0 971 aaKnown RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 NIPA2Q8N8Q9 360 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 KLHL23Q8NBE8 558 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 BHLHE22Q8NFJ8 381 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-208ENST00000410007 HIST1H2ACQ93077 130 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 PPCDCQ96CD2 204 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 MARK4Q96L34 752 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 ADI1Q9BV57 179 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 COPG2Q9UBF2 871 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 SLC9A8Q9Y2E8 581 aa9.07□□□□□ -0.96
PBRM1-208ENST00000410007 A0A1W2PPM1 405 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 NPEPPSL1A6NEC2 478 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 RFXANKO14593 260 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 UNC5CO95185 931 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 PFKMP08237 780 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 LINC00032P0C843 101 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 LIMK2P53671 638 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 GJA9P57773 515 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 DPYSL2Q16555 572 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 MFSD5Q6N075 450 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 PRR23CQ6ZRP0 262 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 PCDH19Q8TAB3 1148 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 DNAJB14Q8TBM8 379 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 BRSK1Q8TDC3 778 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 PSMG2Q969U7 264 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 CLIP3Q96DZ5 547 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 DEPDC7Q96QD5 511 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 TRIT1Q9H3H1 467 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 POLMQ9NP87 494 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 ZC4H2Q9NQZ6 224 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 IGSF9Q9P2J2 1179 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 ZNF180Q9UJW8 692 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 LRCH1Q9Y2L9 728 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 PLLPQ9Y342 182 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 hCG_2014768A0A024R1R8 64 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SERPINB7O75635 380 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 HOXB6P17509 224 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 MAGEA10P43363 369 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 TNK2Q07912 1038 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 GRSF1Q12849 480 aaKnown RBP eCLIP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SF1Q15637 639 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 GPAT3Q53EU6 434 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 MACC1Q6ZN28 852 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 LRRC74BQ6ZQY2 392 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 FGD2Q7Z6J4 655 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 TMEM192Q8IY95 271 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SPATA22Q8NHS9 363 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 RNFT2Q96EX2 444 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 HIC2Q96JB3 615 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 GPR21Q99679 349 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 AARSD1Q9BTE6 412 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 C1orf50Q9BV19 199 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SLC4A5Q9BY07 1137 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 C3orf14Q9HBI5 128 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 NUDT4Q9NZJ9 180 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 ATP6AP2A0A1C7CYW4 349 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 TCRBV7S2A1N4TA0A589 114 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 EDF1O60869 148 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 ATP6AP2O75787 350 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 TNFAIP8O95379 198 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 TGDSO95455 350 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 PCSK2P16519 638 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 JAG1P78504 1218 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SPATA19Q7Z5L4 167 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 CTU1Q7Z7A3 348 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 WDR36Q8NI36 951 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SCAMP5Q8TAC9 235 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 KCTD13Q8WZ19 329 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 RORBQ92753 470 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SMAD5Q99717 465 aaKnown RBP9.06□□□□□ -0.96
PBRM1-208ENST00000410007 UNC93B1Q9H1C4 597 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 MINDY3Q9H8M7 445 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 SGK2Q9HBY8 427 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 ATP6V1HQ9UI12 483 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 LZTS1Q9Y250 596 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 MFHAS1Q9Y4C4 1052 aa9.06□□□□□ -0.96
PBRM1-208ENST00000410007 CICQ96RK0 1608 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms