RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-205	ENST00000409952	ERAP1	Q9NZ08	941 aa		4.97	□□□□□ -1.61
LSM5-205	ENST00000409952	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.97	□□□□□ -1.61
LSM5-205	ENST00000409952	SPATA31A1	Q5TZJ5	1347 aa		4.97	□□□□□ -1.61
LSM5-205	ENST00000409952	TCRBV7S3A2	A0A539	114 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SYCE3	A1L190	88 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TARSL2	A2RTX5	802 aa	Known RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	NARS	O43776	548 aa	Known RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SMPD2	O60906	423 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	FZD7	O75084	574 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	REC8	O95072	547 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	HIST1H2AB	P04908	130 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	UROS	P10746	265 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	RPS2	P15880	293 aa	Known RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	CCNA2	P20248	432 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	HIST1H2AD	P20671	130 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	KLRC2	P26717	231 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SOAT1	P35610	550 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	PEX19	P40855	299 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	IL15	P40933	162 aa	Predicted RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	CASP9	P55211	416 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TAS2R40	P59535	323 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	DGCR2	P98153	550 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SLC25A3	Q00325	362 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	CFHR3	Q02985	330 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	PPAT	Q06203	517 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	MZT1	Q08AG7	82 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	DLG2	Q15700	870 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	USP41	Q3LFD5	358 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	C6orf141	Q5SZD1	244 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	LRIF1	Q5T3J3	769 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	VWA5B1	Q5TIE3	1220 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TMEM268	Q5VZI3	342 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	PLA2G4F	Q68DD2	849 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	IGFL4	Q6B9Z1	124 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	HEPHL1	Q6MZM0	1159 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	KIRREL2	Q6UWL6	708 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	OLFM4	Q6UX06	510 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	KCTD9	Q7L273	389 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	HIST3H2A	Q7L7L0	130 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	ABI3BP	Q7Z7G0	1075 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TBC1D26	Q86UD7	250 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TSPAN33	Q86UF1	283 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	KLB	Q86Z14	1044 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SFTPA1	Q8IWL2	248 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SFRP1	Q8N474	314 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SLC16A11	Q8NCK7	471 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	OR7G3	Q8NG95	312 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	MYCBPAP	Q8TBZ2	947 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	LPIN2	Q92539	896 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	CHFR	Q96EP1	664 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	GAL3ST4	Q96RP7	486 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SIN3A	Q96ST3	1273 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	RUFY1	Q96T51	708 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	PARK7	Q99497	189 aa	Known RBP	4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	ALG8	Q9BVK2	526 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TEX13B	Q9BXU2	312 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SPATC1L	Q9H0A9	340 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SLCO5A1	Q9H2Y9	848 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TUFT1	Q9NNX1	390 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	ASNSD1	Q9NWL6	643 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	TRPM5	Q9NZQ8	1165 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SEMA5B	Q9P283	1151 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	COPG2	Q9UBF2	871 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	ADGRA2	Q96PE1	1338 aa		4.96	□□□□□ -1.62
LSM5-205	ENST00000409952	SMIM30	A4D0T7	59 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	WIPF3	A6NGB9	483 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	EBAG9	O00559	213 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	CYR61	O00622	381 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ALPP	P05187	535 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ALPPL2	P10696	532 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	PCNA	P12004	261 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	GJA1	P17302	382 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	EPHB2	P29323	1055 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	CYP2C18	P33260	490 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	PCGF2	P35227	344 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	VPS41	P49754	854 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ZNF84	P51523	738 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ADAR	P55265	1226 aa	Known RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	NME5	P56597	212 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	AKAP17A	Q02040	695 aa	Known RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	LRRC74A	Q0VAA2	488 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	TCTN1	Q2MV58	587 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	FUT11	Q495W5	492 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	HSP90AA5P	Q58FG0	334 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	RABL3	Q5HYI8	236 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	SHE	Q5VZ18	495 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	TMEM198	Q66K66	360 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	TMEM211	Q6ICI0	200 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ARMC6	Q6NXE6	501 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ANKRD16	Q6P6B7	361 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	LCTL	Q6UWM7	567 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ADIPOR2	Q86V24	386 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	LPCAT1	Q8NF37	534 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	CEP76	Q8TAP6	659 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	SLC13A3	Q8WWT9	602 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	KAZALD1	Q96I82	304 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	FAM111A	Q96PZ2	611 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms