RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TMEM216Q9P0N5 145 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SLC8A2Q9UPR5 921 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PKP3Q9Y446 797 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RANBP2P49792 3224 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CEP290O15078 2479 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PIKFYVEQ9Y2I7 2098 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 AGAP14A8MT82 685 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TARM1B6A8C7 271 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 IMPDH2P12268 514 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 MC4RP32245 332 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 SLC26A3P40879 764 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ADGRE1Q14246 886 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PUS10Q3MIT2 529 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TAF1BQ53T94 588 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 HECTD2Q5U5R9 776 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PSAPL1Q6NUJ1 521 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CRTC1Q6UUV9 634 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 USP45Q70EL2 814 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 MTSS1LQ765P7 747 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 SDCCAG8Q86SQ7 713 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TRIM42Q8IWZ5 723 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 RDH11Q8TC12 318 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 GRAMD1AQ96CP6 724 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ELMO2Q96JJ3 720 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 UBXN10Q96LJ8 280 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 KXD1Q9BQD3 176 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 AARSD1Q9BTE6 412 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 GPR63Q9BZJ6 419 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CIPCQ9C0C6 399 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 FGFR1OP2Q9NVK5 253 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CLDND1Q9NY35 253 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 IL36AQ9UHA7 158 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 VPS9D1Q9Y2B5 631 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 STARD13Q9Y3M8 1113 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PRRC2BQ5JSZ5 2229 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 C1orf232A0A0U1RR37 186 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PHGDHO43175 533 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 SNX3O60493 162 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 LEFTY1O75610 366 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 KLHL2O95198 593 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 UGT2B4P06133 528 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 APOA4P06727 396 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 VIMP08670 466 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 SBK3P0C264 359 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PRSS56P0CW18 603 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 LHCGRP22888 699 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 GMPRP36959 345 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 MAGEA9P43362 315 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 RECQLP46063 649 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TTPAP49638 278 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 POLR2LP62875 67 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 KDSRQ06136 332 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CACNG1Q06432 222 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 DLG1Q12959 904 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 HTR4Q13639 388 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ENPP2Q13822 863 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 GRM2Q14416 872 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 GRIN2CQ14957 1233 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TSNAXIP1Q2TAA8 658 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 HNRNPA1L2Q32P51 320 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 AARS2Q5JTZ9 985 aaKnown RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CPLX4Q7Z7G2 160 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 LDB1Q86U70 411 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 YAF2Q8IY57 180 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 DTX3LQ8TDB6 740 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 KLHL32Q96NJ5 620 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 BRD9Q9H8M2 597 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF358Q9NW07 568 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 NFKBIL1Q9UBC1 381 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 HCN2Q9UL51 889 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 MED16Q9Y2X0 877 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ACOT9Q9Y305 439 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 VWA7Q9Y334 891 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 COMMD10Q9Y6G5 202 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 A0A0U1RQS6 177 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 EDDM13A0A1B0GTR0 161 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 G3V2L1 256 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 SNNO75324 88 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CLDN7O95471 211 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 C1SP09871 688 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 FGF3P11487 239 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF30P17039 623 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 BPIP17213 487 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 BGNP21810 368 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CDKN2DP55273 166 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ST8SIA6P61647 398 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ITPRIPL2Q3MIP1 535 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF805Q5CZA5 627 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 C9orf64Q5T6V5 341 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 GKAP1Q5VSY0 366 aaPredicted RBP5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CES4AQ5XG92 561 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 LRRC66Q68CR7 880 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 CERS6Q6ZMG9 384 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 TSPAN33Q86UF1 283 aa5.5□□□□□ -1.53
EPHA4-202ENST00000409854 PIANPQ8IYJ0 282 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms