RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LRRC40Q9H9A6 602 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 HACD3Q9P035 362 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 PAK5Q9P286 719 aa22.29■■□□□ 1.16
PTCD3-203ENST00000409783 NFKBIL1Q9UBC1 381 aaPredicted RBP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 CNOT1A5YKK6 2376 aaKnown RBP22.29■■□□□ 1.16
PTCD3-203ENST00000409783 DCDC2BA2VCK2 349 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 CTAGE9A4FU28 777 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 SH3BP5O60239 455 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 HMGCLP35914 325 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 SEMA5AQ13591 1074 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 KCTD19Q17RG1 926 aaPredicted RBP22.28■■□□□ 1.16
PTCD3-203ENST00000409783 RAET1GQ6H3X3 334 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 ADAMTSL4Q6UY14 1074 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 HEATR4Q86WZ0 1026 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 ATL2Q8NHH9 583 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 BLOC1S5Q8TDH9 187 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 FAM83DQ9H4H8 585 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 DNAJC28Q9NX36 388 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 IL17CQ9P0M4 197 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 BTBD3Q9Y2F9 522 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 SAR1BQ9Y6B6 198 aa22.28■■□□□ 1.16
PTCD3-203ENST00000409783 GOLGA6CA6NDK9 693 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 GOLGA6BA6NDN3 693 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 TMEM202A6NGA9 273 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 PSMD3O43242 534 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 CBFA2T3O75081 653 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 PIAS2O75928 621 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 GOLGA6DP0CG33 693 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 MYCLP1P12525 358 aaPredicted RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 BPIP17213 487 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 CSRP1P21291 193 aaKnown RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 COILP38432 576 aaPredicted RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 DCDC1P59894 354 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 ETF1P62495 437 aaKnown RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 CDK3Q00526 305 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 NAXDQ8IW45 347 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 SLC25A45Q8N413 288 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 WDR92Q96MX6 357 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 CAMK1GQ96NX5 476 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 ZNF106Q9H2Y7 1883 aaKnown RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 TCEAL2Q9H3H9 227 aaPredicted RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 RAB6BQ9NRW1 208 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 GOLGA6AQ9NYA3 693 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 CNOT6Q9ULM6 557 aaKnown RBP22.27■■□□□ 1.16
PTCD3-203ENST00000409783 NEU2Q9Y3R4 380 aa22.27■■□□□ 1.16
PTCD3-203ENST00000409783 ERI2A8K979 691 aaKnown RBP22.26■■□□□ 1.15
PTCD3-203ENST00000409783 FADS2P1A8MWK0 482 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 CACNB4O00305 520 aaPredicted RBP22.26■■□□□ 1.15
PTCD3-203ENST00000409783 FLRT2O43155 660 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 SDC3O75056 442 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 PHF2O75151 1096 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 SUN1O94901 812 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 SLC4A1P02730 911 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 DGKAP23743 735 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 ACTN2P35609 894 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 GPR1P46091 355 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 ALG11Q2TAA5 492 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 ENPP7Q6UWV6 458 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 C4orf22Q6V702 233 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 GLT6D1Q7Z4J2 308 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 RBFAQ8N0V3 343 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 DEFB124Q8NES8 71 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 BAHD1Q8TBE0 780 aaPredicted RBP22.26■■□□□ 1.15
PTCD3-203ENST00000409783 OR1E3Q8WZA6 343 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 COX14Q96I36 57 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 FGF22Q9HCT0 170 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 PHPT1Q9NRX4 125 aaPredicted RBP22.26■■□□□ 1.15
PTCD3-203ENST00000409783 UCKL1Q9NWZ5 548 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 FEZ2Q9UHY8 353 aaPredicted RBP22.26■■□□□ 1.15
PTCD3-203ENST00000409783 PCOLCE2Q9UKZ9 415 aa22.26■■□□□ 1.15
PTCD3-203ENST00000409783 COL5A1P20908 1838 aaPredicted RBP22.25■■□□□ 1.15
PTCD3-203ENST00000409783 PYGLP06737 847 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 GIMD1P0DJR0 217 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 JUNDP17535 347 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 HTR1BP28222 390 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 HNRNPKP61978 463 aaKnown RBP eCLIP22.25■■□□□ 1.15
PTCD3-203ENST00000409783 SUZ12Q15022 739 aaKnown RBP22.25■■□□□ 1.15
PTCD3-203ENST00000409783 CCDC137Q6PK04 289 aaKnown RBP22.25■■□□□ 1.15
PTCD3-203ENST00000409783 GSTA5Q7RTV2 222 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 PHACTR4Q8IZ21 702 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 TSACCQ96A04 125 aaPredicted RBP22.25■■□□□ 1.15
PTCD3-203ENST00000409783 FRMD8Q9BZ67 464 aaPredicted RBP22.25■■□□□ 1.15
PTCD3-203ENST00000409783 CDH19Q9H159 772 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 BPIFA1Q9NP55 256 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 RAD18Q9NS91 495 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 KCTD3Q9Y597 815 aa22.25■■□□□ 1.15
PTCD3-203ENST00000409783 PDE2AO00408 941 aaPredicted RBP22.24■■□□□ 1.15
PTCD3-203ENST00000409783 TNFRSF10CO14798 259 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 BUD23O43709 281 aaKnown RBP22.24■■□□□ 1.15
PTCD3-203ENST00000409783 FUCA1P04066 466 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 CEACAM5P06731 702 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 GRIA1P42261 906 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 SRP54P61011 504 aaKnown RBP22.24■■□□□ 1.15
PTCD3-203ENST00000409783 PPARDQ03181 441 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 PTPRCAPQ14761 206 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 TAF1AQ15573 450 aaPredicted RBP22.24■■□□□ 1.15
PTCD3-203ENST00000409783 HS1BP3Q53T59 392 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 ALS2CLQ60I27 953 aa22.24■■□□□ 1.15
PTCD3-203ENST00000409783 OR56A4Q8NGH8 313 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms