RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 USP15Q9Y4E8 981 aaPredicted RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 SRPRBQ9Y5M8 271 aaKnown RBP6.4□□□□□ -1.38
LSM5-203ENST00000409782 SF3B1O75533 1304 aaKnown RBP eCLIP6.4□□□□□ -1.393e-7■■■■■ 27.3
LSM5-203ENST00000409782 TDRD15B5MCY1 1934 aaKnown RBP6.4□□□□□ -1.39
LSM5-203ENST00000409782 MYH15Q9Y2K3 1946 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 ZAR1LA6NP61 321 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TMEM189-UBE2V1I3L0A0 370 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 PTGESO14684 152 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TSPAN4O14817 238 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 SLC16A4O15374 487 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TOM1L1O75674 476 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 HEXIM1O94992 359 aaKnown RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 CCNDBP1O95273 360 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 CXCL14O95715 111 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 C1RP00736 705 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 MMP8P22894 467 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 CA8P35219 290 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 ARL3P36405 182 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 NHLH2Q02577 135 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 OCA2Q04671 838 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TLE3Q04726 772 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 ITIH3Q06033 890 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 PDCLQ13371 301 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TUBB3Q13509 450 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 KARSQ15046 597 aaKnown RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 SPATS1Q496A3 300 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 AASDHQ4L235 1098 aaPredicted RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 RBM20Q5T481 1227 aaKnown RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 CFAP58Q5T655 872 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 C1QL3Q5VWW1 255 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 FUT10Q6P4F1 479 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 SYCE2Q6PIF2 218 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 CLEC9AQ6UXN8 241 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TAX1BP1Q86VP1 789 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 ELOA2Q8IYF1 753 aaPredicted RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 IZUMO1Q8IYV9 350 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 TMEM171Q8WVE6 324 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 ATRIPQ8WXE1 791 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 LARP4BQ92615 738 aaKnown RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 UROC1Q96N76 676 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 GNRHR2Q96P88 292 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 USP28Q96RU2 1077 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 PLIN2Q99541 437 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 SSBP3Q9BWW4 388 aaPredicted RBP6.39□□□□□ -1.39
LSM5-203ENST00000409782 C1QTNF1Q9BXJ1 281 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 AP1M1Q9BXS5 423 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 SFXN1Q9H9B4 322 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 PARVGQ9HBI0 331 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.39□□□□□ -1.39
LSM5-203ENST00000409782 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 SMPD4Q9NXE4 827 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 ADAM28Q9UKQ2 775 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 CLIC4Q9Y696 253 aa6.39□□□□□ -1.39
LSM5-203ENST00000409782 MYH11P35749 1972 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 LOC730098B7Z3J9 87 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 PEX12O00623 359 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 GPR42O15529 346 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 YEATS4O95619 227 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 GPANK1O95872 356 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 PIGRP01833 764 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ALADP13716 330 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 KCNE1P15382 129 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 CHN1P15882 459 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 MARCKSP29966 332 aaPredicted RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 THBS4P35443 961 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ELAVL2Q12926 359 aaKnown RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 MPP3Q13368 585 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 SLC39A14Q15043 492 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 NAB2Q15742 525 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 KYAT1Q16773 422 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 XKR4Q5GH76 650 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 SPECC1Q5M775 1068 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 CES5AQ6NT32 575 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 FAM173BQ6P4H8 233 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 TMCO3Q6UWJ1 677 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 CCDC73Q6ZRK6 1079 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ZNF366Q8N895 744 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 CMASQ8NFW8 434 aaPredicted RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 LRRC15Q8TF66 581 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 SNX19Q92543 992 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 FAM136AQ96C01 138 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 MCRS1Q96EZ8 462 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ZBTB45Q96K62 511 aaPredicted RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 ZNF396Q96N95 335 aaPredicted RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 KLHL5Q96PQ7 755 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 HAPLN3Q96S86 360 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 EIF3CQ99613 913 aaKnown RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 ITPAQ9BY32 194 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 INTS2Q9H0H0 1204 aaKnown RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 S1PR5Q9H228 398 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ST6GALNAC4Q9H4F1 302 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 STN1Q9H668 368 aaKnown RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 IL21RQ9HBE5 538 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 POLD4Q9HCU8 107 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 MIOSQ9NXC5 875 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 HCN3Q9P1Z3 774 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 ANKFY1Q9P2R3 1169 aa6.38□□□□□ -1.39
LSM5-203ENST00000409782 NFKBIL1Q9UBC1 381 aaPredicted RBP6.38□□□□□ -1.39
LSM5-203ENST00000409782 SEL1LQ9UBV2 794 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms