RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 P2RX3P56373 397 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 PPATQ06203 517 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TRDNQ13061 729 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 CUL4AQ13619 759 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TNFAIP1Q13829 316 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 BYSLQ13895 437 aaKnown RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 ZRSR2Q15696 482 aaKnown RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 ME3Q16798 604 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 SLC4A8Q2Y0W8 1093 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TMEM268Q5VZI3 342 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 NUGGCQ68CJ6 796 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 CAPRIN2Q6IMN6 1127 aaKnown RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 USP50Q70EL3 339 aaPredicted RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 CHST3Q7LGC8 479 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 CAMK1DQ8IU85 385 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 APOBEC3FQ8IUX4 373 aaKnown RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 DPP10Q8N608 796 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 SCAIQ8N9R8 606 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 CEP70Q8NHQ1 597 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 ESR2Q92731 530 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 INPP5DQ92835 1189 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 ZSCAN31Q96LW9 406 aaPredicted RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 WDR77Q9BQA1 342 aaPredicted RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 IFT27Q9BW83 186 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 LRRC2Q9BYS8 371 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 B3GNT4Q9C0J1 378 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 LY9Q9HBG7 655 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 VEZTQ9HBM0 779 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 SIRT3Q9NTG7 399 aaPredicted RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 GGA3Q9NZ52 723 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TMOD2Q9NZR1 351 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TBC1D14Q9P2M4 693 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 WNT16Q9UBV4 365 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 PCDHA7Q9UN72 937 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 GDAQ9Y2T3 454 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 PARP14Q460N5 1801 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 VWA3AA6NCI4 1184 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 OR6C68A6NDL8 312 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 RANBP6O60518 1105 aaKnown RBP4.54□□□□□ -1.68
CLK1-203ENST00000409769 NMT2O60551 498 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 PFKFB2O60825 505 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 AKR1B1P15121 316 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 RXRAP19793 462 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 DDIT3P35638 169 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 CLCNKBP51801 687 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 TFAP4Q01664 338 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 EGR4Q05215 589 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 GOLGA8FQ08AF8 430 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 BECN1Q14457 450 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 RPE65Q16518 533 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 DUSP6Q16828 381 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 TMEM95Q3KNT9 176 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 ZNF324BQ6AW86 544 aaPredicted RBP4.54□□□□□ -1.68
CLK1-203ENST00000409769 HMBOX1Q6NT76 420 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 CYP26C1Q6V0L0 522 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 IQCA1Q86XH1 822 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 HSCBQ8IWL3 235 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 ZNF444Q8N0Y2 327 aaPredicted RBP4.54□□□□□ -1.68
CLK1-203ENST00000409769 SETD9Q8NE22 299 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 GABPB2Q8TAK5 448 aaPredicted RBP4.54□□□□□ -1.68
CLK1-203ENST00000409769 TMEM163Q8TC26 289 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 ASB5Q8WWX0 329 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 RNFT2Q96EX2 444 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 ZNF274Q96GC6 653 aaPredicted RBP4.54□□□□□ -1.68
CLK1-203ENST00000409769 COG8Q96MW5 612 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 NPLQ9BXD5 320 aaPredicted RBP4.54□□□□□ -1.68
CLK1-203ENST00000409769 TMEM39BQ9GZU3 492 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 DEFB129Q9H1M3 183 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 KLHL31Q9H511 634 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 RAI2Q9Y5P3 530 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 TCHHQ07283 1943 aa4.54□□□□□ -1.68
CLK1-203ENST00000409769 RLFQ13129 1914 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 MYH15Q9Y2K3 1946 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 TSPY2A6NKD2 308 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 IFIT3O14879 490 aaKnown RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 CTDNEP1O95476 244 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 TSPY3P0CV98 308 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 TSPY8P0CW00 308 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 FGF3P11487 239 aaPredicted RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 ARSBP15848 533 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 ARRB2P32121 409 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 HNF1BP35680 557 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 MLH1P40692 756 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 SKIV2L2P42285 1042 aaKnown RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 RFX2P48378 723 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 TBL3Q12788 808 aaKnown RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 TROAPQ12815 778 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 WTAPQ15007 396 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 SHROOM1Q2M3G4 852 aaPredicted RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 WDR45BQ5MNZ6 344 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 WASHC2DQ5SRD0 308 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 NCAPH2Q6IBW4 605 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 SLC16A12Q6ZSM3 486 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 WDR5BQ86VZ2 330 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 TMC8Q8IU68 726 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 TMTC2Q8N394 836 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 ENGASEQ8NFI3 743 aa4.53□□□□□ -1.68
CLK1-203ENST00000409769 CMASQ8NFW8 434 aaPredicted RBP4.53□□□□□ -1.68
CLK1-203ENST00000409769 GTF3C6Q969F1 213 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms