RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FOXM1Q08050 763 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 ARL16Q0P5N6 197 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 KRT81Q14533 505 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 KRT24Q2M2I5 525 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PLEKHA7Q6IQ23 1121 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 FOXL2NBQ6ZUU3 175 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 USP43Q70EL4 1123 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 R3HCC1LQ7Z5L2 792 aaKnown RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 ZNF34Q8IZ26 560 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 TSPYL6Q8N831 410 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 LNX1Q8TBB1 728 aaPredicted RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 METTL6Q8TCB7 284 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PSPC1Q8WXF1 523 aaKnown RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 PCGF1Q9BSM1 259 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 POU2F3Q9UKI9 436 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 KDM3AQ9Y4C1 1321 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 A0A0B4J293 547 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 GOLGA6L9A6NEM1 432 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 NKX2-2O95096 273 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 CRYAAP02489 173 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 ATP1A1P05023 1023 aaKnown RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 UBL4AP11441 157 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 CETPP11597 493 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 ITGA2P17301 1181 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 S1PR1P21453 382 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 CORO1AP31146 461 aaKnown RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 CASP6P55212 293 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 CSNK2A1P68400 391 aaPredicted RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 PDE1BQ01064 536 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 FRG1Q14331 258 aaKnown RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 SYT16Q17RD7 645 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 GFI1BQ5VTD9 330 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 SIGIRRQ6IA17 410 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 INO80CQ6PI98 192 aaPredicted RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 RNF113BQ8IZP6 322 aaKnown RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 PCDH20Q8N6Y1 951 aaKnown RBP4.05□□□□□ -1.76
PMS1-203ENST00000409593 CSNK2A3Q8NEV1 391 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 HMGCLL1Q8TB92 370 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 CDCA5Q96FF9 252 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 C1QTNF5Q9BXJ0 243 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 JMJD4Q9H9V9 463 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 ABCF3Q9NUQ8 709 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 TAF1P21675 1872 aa4.05□□□□□ -1.76
PMS1-203ENST00000409593 A0A1B0GVC2 190 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 A0A1W2PPH5 198 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 PLEKHD1A6NEE1 506 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 C16orf97H3BN30 126 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 SPARCP09486 303 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 HLA-DOBP13765 273 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 ICAM3P32942 547 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 USP8P40818 1118 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 DCTN2Q13561 401 aaKnown RBP4.04□□□□□ -1.76
PMS1-203ENST00000409593 CCDC96Q2M329 555 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 ZNF280DQ6N043 979 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 GFRALQ6UXV0 394 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 DPPA4Q7L190 304 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 TMEM219Q86XT9 240 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 C1orf87Q8N0U7 546 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 OR13A1Q8NGR1 328 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 GRAMD2BQ96HH9 432 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 HARBI1Q96MB7 349 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 PDCL3Q9H2J4 239 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 SEBOXQ9HB31 216 aaPredicted RBP4.04□□□□□ -1.76
PMS1-203ENST00000409593 SDF2L1Q9HCN8 221 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 ACSS1Q9NUB1 689 aaPredicted RBP4.04□□□□□ -1.76
PMS1-203ENST00000409593 MDFICQ9P1T7 246 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 RALYQ9UKM9 306 aaKnown RBP4.04□□□□□ -1.76
PMS1-203ENST00000409593 ZNF711Q9Y462 761 aa4.04□□□□□ -1.76
PMS1-203ENST00000409593 NPIPB15A6NHN6 443 aaPredicted RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 SEC14L2O76054 403 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 MYOD1P15172 320 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 ZNF182P17025 639 aaPredicted RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 ISL1P61371 349 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 TMEM115Q12893 351 aaPredicted RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 DPCR1Q3MIW9 517 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 ALFQ53S48 1182 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 CXorf66Q5JRM2 361 aaPredicted RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 MMS22LQ6ZRQ5 1243 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 CACNA2D4Q7Z3S7 1137 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 KMT5CQ86Y97 462 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 KCNG4Q8TDN1 519 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 NR4A3Q92570 626 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 ABTB1Q969K4 478 aaPredicted RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 INTS12Q96CB8 462 aaKnown RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 ACOX2Q99424 681 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 PCYT2Q99447 389 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 RANBP17Q9H2T7 1088 aaKnown RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 PLEKHA5Q9HAU0 1116 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 WDR81Q562E7 1941 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 FAM237AA0A1B0GTK4 181 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 TGFB1I1O43294 461 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 FMO5P49326 533 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 CCR9P51686 369 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 F2RL1P55085 397 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 TAS2R38P59533 333 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 RPL7AP62424 266 aaKnown RBP4.03□□□□□ -1.76
PMS1-203ENST00000409593 OLR1P78380 273 aa4.03□□□□□ -1.76
PMS1-203ENST00000409593 G3BP1Q13283 466 aaKnown RBP eCLIP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms