RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ASIC4Q96FT7 647 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 SERPINB11Q96P15 392 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 C1QTNF1Q9BXJ1 281 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 CRISPLD1Q9H336 500 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 TCAF1Q9Y4C2 921 aa13.37□□□□□ -0.27
COL6A2-204ENST00000409416 HEMK1Q9Y5R4 338 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-204ENST00000409416 PAPPA2Q9BXP8 1791 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SLCO1B7G3V0H7 640 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 H3BSA7 217 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 PDLIM1O00151 329 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 INPP4BO15327 924 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SERPINF2P08697 491 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 OXCT1P55809 520 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 MYLK3Q32MK0 819 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 RTP2Q5QGT7 225 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 PTRHD1Q6GMV3 140 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ZBTB49Q6ZSB9 765 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ATP6V0D2Q8N8Y2 350 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 CATSPER1Q8NEC5 780 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 VAT1Q99536 393 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 MRPL57Q9BQC6 102 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 FAM124BQ9H5Z6 455 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 DNAAF2Q9NVR5 837 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 FKBPLQ9UIM3 349 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 A0A0C4DFX4 3053 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 MBLAC1A4D2B0 266 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ACRP10323 421 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 NFKBIAP25963 317 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 XIAPP98170 497 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SULT2A1Q06520 285 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ZNF177Q13360 481 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 TSTD2Q5T7W7 516 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 PIWIL4Q7Z3Z4 852 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 BBS5Q8N3I7 341 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 KCTD13Q8WZ19 329 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 NT5C3BQ969T7 300 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 GPR21Q99679 349 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ENTPD7Q9NQZ7 604 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 GIT1Q9Y2X7 761 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 CDC7O00311 574 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SEPT4O43236 478 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 TFAP2AP05549 437 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 HGFP14210 728 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 NR4A1P22736 598 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 MAGEA12P43365 314 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ACLYP53396 1101 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 RHOAP61586 193 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 TIGD2Q4W5G0 525 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SIRPB2Q5JXA9 342 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 PAQR3Q6TCH7 311 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SAPCD2Q86UD0 394 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 CCDC117Q8IWD4 279 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 ZNF786Q8N393 782 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 METTL25Q8N6Q8 603 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SIDT2Q8NBJ9 832 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 RDH11Q8TC12 318 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 FAM110BQ8TC76 370 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 NTAN1Q96AB6 310 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 EML4Q9HC35 981 aaKnown RBP13.36□□□□□ -0.27
COL6A2-204ENST00000409416 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 RIMS3Q9UJD0 308 aa13.36□□□□□ -0.27
COL6A2-204ENST00000409416 TET1Q8NFU7 2136 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 A0A0U1RQF3 1178 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 SMIM31A0A1B0GVY4 71 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PABPN1LA6NDY0 278 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 A8MT66 165 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 MAFKO60675 156 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 LRATO95237 230 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CNPP09543 421 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 SMIM18P0DKX4 95 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 MTHFD1P11586 935 aaKnown RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 KCNC1P48547 511 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PPM1FP49593 454 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CDKN2DP55273 166 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 MS4A13Q5J8X5 152 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CROCCQ5TZA2 2017 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 TXNDC8Q6A555 127 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 B3GNT6Q6ZMB0 384 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 MIPOL1Q8TD10 442 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 CNDP1Q96KN2 507 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 MRGPRX2Q96LB1 330 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 DCUN1D5Q9BTE7 237 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 KANSL1LA0AUZ9 987 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 BCAS2O75934 225 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-204ENST00000409416 PAX3P23760 479 aa13.35□□□□□ -0.27
COL6A2-204ENST00000409416 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms