RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NFATC2Q13469 925 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 MAN2A1Q16706 1144 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 KLHDC7AQ5VTJ3 777 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
CHMP3-203ENST00000409225 HSD11B1LQ7Z5J1 315 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 FNIP1Q8TF40 1166 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 DTD2Q96FN9 168 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 ULBP3Q9BZM4 244 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 SLC39A8Q9C0K1 460 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 CROTQ9UKG9 612 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 FZD10Q9ULW2 581 aa16.6■□□□□ 0.25
CHMP3-203ENST00000409225 TTC24A2A3L6 582 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 ARHGAP42A6NI28 874 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 CCP110O43303 1012 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 HEXIM1O94992 359 aaKnown RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 EML2O95834 649 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 CYP1A1P04798 512 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 NDST2P52849 883 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 TPI1P60174 286 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 MAP7Q14244 749 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 SFRP1Q8N474 314 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 PDCD6IPQ8WUM4 868 aaKnown RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 SP110Q9HB58 689 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 KCTD5Q9NXV2 234 aa16.59■□□□□ 0.25
CHMP3-203ENST00000409225 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 OAS3Q9Y6K5 1087 aaKnown RBP16.59■□□□□ 0.25
CHMP3-203ENST00000409225 F8VZ95 297 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 DNAJB5O75953 348 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 CPP00450 1065 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 ZNF28P17035 718 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 GPR1P46091 355 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 PMS2P54278 862 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 AP1S1P61966 158 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 FMO1Q01740 532 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 HHEXQ03014 270 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 FOXM1Q08050 763 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 NSUN2Q08J23 767 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHMP3-203ENST00000409225 TPD52L1Q16890 204 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-203ENST00000409225 C6orf15Q6UXA7 325 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-203ENST00000409225 ARHGAP36Q6ZRI8 547 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 Q6ZVL8 140 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 TRIM74Q86UV6 250 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 GALNT6Q8NCL4 622 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 SCARF2Q96GP6 870 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-203ENST00000409225 TWSG1Q9GZX9 223 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 CASS4Q9NQ75 786 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 CUEDC1Q9NWM3 386 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-203ENST00000409225 GPATCH2LQ9NWQ4 482 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 PCDHGC4Q9Y5F7 938 aa16.58■□□□□ 0.24
CHMP3-203ENST00000409225 DFFAO00273 331 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 PES1O00541 588 aaKnown RBP16.57■□□□□ 0.24
CHMP3-203ENST00000409225 GFPT2O94808 682 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 UCHL3P15374 230 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 CHRNB2P17787 502 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 LHCGRP22888 699 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 TEAD1P28347 426 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 CDR2Q01850 454 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 PTP4A2Q12974 167 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 PTPRRQ15256 657 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 VWA3BQ502W6 1294 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 PYCR3Q53H96 274 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 MIIPQ5JXC2 388 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 GALNT13Q8IUC8 556 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 STK33Q9BYT3 514 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 ADAM22Q9P0K1 906 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 CD84Q9UIB8 345 aa16.57■□□□□ 0.24
CHMP3-203ENST00000409225 CENPEQ02224 2701 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 PIPSLA2A3N6 862 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 INPP4BO15327 924 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 CYP2A6P11509 494 aaPredicted RBP16.56■□□□□ 0.24
CHMP3-203ENST00000409225 TNFAIP3P21580 790 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 DCTP40126 519 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 NADK2Q4G0N4 442 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 HSP90AA4PQ58FG1 418 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 RFLNAQ6ZTI6 216 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 TSPAN33Q86UF1 283 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 CBARPQ8N350 705 aaPredicted RBP16.56■□□□□ 0.24
CHMP3-203ENST00000409225 STAMBPL1Q96FJ0 436 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 STN1Q9H668 368 aaKnown RBP16.56■□□□□ 0.24
CHMP3-203ENST00000409225 SIDT1Q9NXL6 827 aaKnown RBP16.56■□□□□ 0.24
CHMP3-203ENST00000409225 DONSONQ9NYP3 566 aa16.56■□□□□ 0.24
CHMP3-203ENST00000409225 RCOR3Q9P2K3 495 aaPredicted RBP16.56■□□□□ 0.24
CHMP3-203ENST00000409225 TNRC6AQ8NDV7 1962 aaKnown RBP16.56■□□□□ 0.24
CHMP3-203ENST00000409225 ESPL1Q14674 2120 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 A0A0U1RQS6 177 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 NPIPB15A6NHN6 443 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 HTRA2O43464 458 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 KIAA0754O94854 1291 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 DDAH2O95865 285 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 SOD1P00441 154 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 NSFP46459 744 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms