RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 PEX6Q13608 980 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 ITGA9Q13797 1035 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 ARHGEF7Q14155 803 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 ACAP2Q15057 778 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 GLIPR1L2Q4G1C9 344 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 FNDC3BQ53EP0 1204 aaKnown RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 N4BP2L1Q5TBK1 243 aaPredicted RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 HECTD2Q5U5R9 776 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 FAM46CQ5VWP2 391 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 ERAP2Q6P179 960 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 CRTC1Q6UUV9 634 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 CDHR3Q6ZTQ4 885 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 LYSMD3Q7Z3D4 306 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 NLRP8Q86W28 1048 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 NRSN1Q8IZ57 195 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 NKAPQ8N5F7 415 aaKnown RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 GPATCH11Q8N954 259 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 CCDC63Q8NA47 563 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 CCDC197Q8NCU1 140 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 ARMC2Q8NEN0 867 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 CSGALNACT1Q8TDX6 532 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 LPGAT1Q92604 370 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 RAB7BQ96AH8 199 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 VOPP1Q96AW1 172 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 MSANTD3Q96H12 275 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 UBXN10Q96LJ8 280 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 C7orf26Q96N11 449 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 KLHL32Q96NJ5 620 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 MRPL57Q9BQC6 102 aaKnown RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 APOL5Q9BWW9 433 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 FAM107BQ9H098 131 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 TMEM245Q9H330 911 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 C8orf33Q9H7E9 229 aaPredicted RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 FBXO6Q9NRD1 293 aaPredicted RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 THAP1Q9NVV9 213 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 PKD2L2Q9NZM6 624 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 SLC17A6Q9P2U8 582 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 COPG2Q9UBF2 871 aa10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 RUVBL2Q9Y230 463 aaKnown RBP10.29□□□□□ -0.76
SNORD88C-201ENST00000408061 GLYATL1P3A0A0U1RQE8 302 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 TTC34A8MYJ7 566 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PRRT4C9JH25 899 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 C1QTNF3-AMACRE9PGA6 284 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PRMT5O14744 637 aaPredicted RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 VPS26AO75436 327 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 LEFTY1O75610 366 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 KAT7O95251 611 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 LTA4HP09960 611 aaKnown RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PKMP14618 531 aaKnown RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 CTPS1P17812 591 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 FDXRP22570 491 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ITGB7P26010 798 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 SLC6A11P48066 632 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 NUMBP49757 651 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 HK2P52789 917 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ATP6V0D1P61421 351 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 TMPRSS15P98073 1019 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 STX3Q13277 289 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ENPP2Q13822 863 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ZRANB3Q5FWF4 1079 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ARSIQ5FYB1 569 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PPM1JQ5JR12 505 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 DPPA4Q7L190 304 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 CMC1Q7Z7K0 106 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 C12orf40Q86WS4 652 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 SLC41A1Q8IVJ1 513 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 RBFAQ8N0V3 343 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 CHST14Q8NCH0 376 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 OR6K2Q8NGY2 324 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PPP1R14CQ8TAE6 165 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 RHEBL1Q8TAI7 183 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 CYB5D2Q8WUJ1 264 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 KCNJ9Q92806 393 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 DNASE1L2Q92874 299 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PBXIP1Q96AQ6 731 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PDLIM5Q96HC4 596 aaKnown RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 SEC16BQ96JE7 1060 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ZFYVE19Q96K21 471 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 TSSK1BQ9BXA7 367 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 C1QTNF1Q9BXJ1 281 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 MRPL46Q9H2W6 279 aaKnown RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 POMKQ9H5K3 350 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 SUDS3Q9H7L9 328 aaPredicted RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 GPAMQ9HCL2 828 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 MLXIPLQ9NP71 852 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 LATS2Q9NRM7 1088 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 TMEM216Q9P0N5 145 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 MARCH4Q9P2E8 410 aaPredicted RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 PPM1HQ9ULR3 514 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 TMCO1Q9UM00 188 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 ARL2BPQ9Y2Y0 163 aa10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 USP15Q9Y4E8 981 aaPredicted RBP10.28□□□□□ -0.76
SNORD88C-201ENST00000408061 CHD7Q9P2D1 2997 aa10.27□□□□□ -0.76
SNORD88C-201ENST00000408061 C16orf96A6NNT2 1141 aa10.27□□□□□ -0.77
SNORD88C-201ENST00000408061 TMEM114B3SHH9 223 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms