RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HAUS2Q9NVX0 235 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 SLC17A4Q9Y2C5 497 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 TMEM98Q9Y2Y6 226 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 RNF215Q9Y6U7 377 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 KALRNO60229 2985 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 APOL1O14791 398 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 GLB1P16278 677 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 ZNF30P17039 623 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 AK4P27144 223 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 PCBP4P57723 403 aaKnown RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 ERVPABLB-1P60509 514 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 IFI35P80217 286 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 SKOR1P84550 965 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 TLE3Q04726 772 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 AP1B1Q10567 949 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 HLTFQ14527 1009 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 C14orf28Q4W4Y0 310 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 SOWAHCQ53LP3 525 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 LRRC38Q5VT99 294 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 TRIM74Q86UV6 250 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 OR6C4Q8NGE1 309 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 SLC46A1Q96NT5 459 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 BBC3Q96PG8 261 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 MAK16Q9BXY0 300 aaKnown RBP19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 LRRN3Q9H3W5 708 aa19.22■□□□□ 0.67
SMARCB1-204ENST00000407422 D6RAR5 112 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 COMTP21964 271 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 CA4P22748 312 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 RPL26P61254 145 aaKnown RBP19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 DYNLT1P63172 113 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 TCEAL1Q15170 157 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 SARM1Q6SZW1 724 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 ADAMTSL4Q6UY14 1074 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 VSIG1Q86XK7 387 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 RFX6Q8HWS3 928 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 CCNJLQ8IV13 435 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 TC2NQ8N9U0 490 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 ZNF248Q8NDW4 579 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 OLFM3Q96PB7 478 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 RIOK2Q9BVS4 552 aaKnown RBP19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 TRIM5Q9C035 493 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 PRORYQ9H606 182 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 TRNAU1APQ9NX07 287 aaKnown RBP19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 TAAR2Q9P1P5 351 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 LRIT1Q9P2V4 623 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 APPL1Q9UKG1 709 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 INTUQ9ULD6 942 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 ATXN7L1Q9ULK2 861 aaPredicted RBP19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 RPL26L1Q9UNX3 145 aaKnown RBP19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 PLEKHM1Q9Y4G2 1056 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 PCDHGA8Q9Y5G5 932 aa19.21■□□□□ 0.67
SMARCB1-204ENST00000407422 FASNP49327 2511 aaKnown RBP19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 FGF1P05230 155 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 RBMS1P29558 406 aaKnown RBP19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 SLC1A1P43005 524 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 MAZP56270 477 aaKnown RBP19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 CTBSQ01459 385 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 ILF3Q12906 894 aaKnown RBP eCLIP19.2■□□□□ 0.661e-9■■□□□ 11.4
SMARCB1-204ENST00000407422 QPCTQ16769 361 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 SLC30A9Q6PML9 568 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 IGF2-ASQ6U949 168 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 MFSD7Q6UXD7 560 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 ZNF765Q7L2R6 523 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 RHOT1Q8IXI2 618 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 WDR36Q8NI36 951 aaKnown RBP19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 LYSMD1Q96S90 227 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 GSDMCQ9BYG8 508 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 GOLPH3Q9H4A6 298 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 THSD1Q9NS62 852 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 SEPT10Q9P0V9 454 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 TFR2Q9UP52 801 aa19.2■□□□□ 0.66
SMARCB1-204ENST00000407422 SCN8AQ9UQD0 1980 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 CCDC187A0A096LP49 1063 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 ANKRD66B4E2M5 251 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 INPP4BO15327 924 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 IVLP07476 585 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 ADCY8P40145 1251 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 PDK1Q15118 436 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 LLGL1Q15334 1064 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 KDELC2Q7Z4H8 507 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 SPRED1Q7Z699 444 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 NLRP8Q86W28 1048 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 ZDHHC1Q8WTX9 485 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 PATE1Q8WXA2 126 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 SCARF2Q96GP6 870 aaPredicted RBP19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 AGAP3Q96P47 875 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 WDR24Q96S15 920 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 EPB41L5Q9HCM4 733 aa19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 SAE1Q9UBE0 346 aaPredicted RBP19.19■□□□□ 0.66
SMARCB1-204ENST00000407422 C1orf232A0A0U1RR37 186 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 SPOPO43791 374 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 NUDT21O43809 227 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 PNLIPP16233 465 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 MAGEA1P43355 309 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 NOP2P46087 812 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 GALNT3Q14435 633 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 MARK2Q7KZI7 788 aaKnown RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 C17orf82Q86X59 251 aaPredicted RBP19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 NRSN1Q8IZ57 195 aa19.18■□□□□ 0.66
SMARCB1-204ENST00000407422 KIAA1524Q8TCG1 905 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms