RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TNKS2Q9H2K2 1166 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 CD248Q9HCU0 757 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 GTSE1Q9NYZ3 720 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 IL17CQ9P0M4 197 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 RWDD3Q9Y3V2 267 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 GOLGA8QA0A0J9YX86 632 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 A0A0U1RQS6 177 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 GOLGA8OA6NCC3 632 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 GOLGA8NF8WBI6 632 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 NEMP1O14524 444 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 RHOP08100 348 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PGM1P36871 562 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 KCNC1P48547 511 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PITRM1Q5JRX3 1037 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 SH2D4BQ5SQS7 431 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 LYSMD3Q7Z3D4 306 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 RBM15BQ8NDT2 890 aaKnown RBP24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PPP1R36Q96LQ0 422 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 WDR55Q9H6Y2 383 aaPredicted RBP24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 ATP13A3Q9H7F0 1226 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 CDYLQ9Y232 598 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 FAM50BQ9Y247 325 aa24.59■■□□□ 1.53
DNMT3A-206ENST00000406659 PENKP01210 267 aaPredicted RBP24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 PYGLP06737 847 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 ALPIP09923 528 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 TPBGLP0DKB5 382 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 HNRNPLP14866 589 aaKnown RBP eCLIP24.58■■□□□ 1.532e-11■■■■□ 20.2
DNMT3A-206ENST00000406659 IMPDH1P20839 514 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 CCND1P24385 295 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 RAD51Q06609 339 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 AFAP1L2Q8N4X5 818 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 KDM1BQ8NB78 822 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 AGAP11Q8TF27 550 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 STON2Q8WXE9 905 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 MMADHCQ9H3L0 296 aaPredicted RBP24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 SLC30A1Q9Y6M5 507 aa24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 HELZP42694 1942 aaKnown RBP24.58■■□□□ 1.53
DNMT3A-206ENST00000406659 HTRA2O43464 458 aaPredicted RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 DCXO43602 365 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 SOCS5O75159 536 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 PKMP14618 531 aaKnown RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 HMGCLP35914 325 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 UBE3AQ05086 875 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 CACNG1Q06432 222 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 DNAL1Q4LDG9 190 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 DGKKQ5KSL6 1271 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 PAQR3Q6TCH7 311 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 TMEM25Q86YD3 366 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 CMTM5Q96DZ9 223 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 FAR2Q96K12 515 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 LMLNQ96KR4 655 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 RPL10LQ96L21 214 aaKnown RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 C17orf80Q9BSJ5 609 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 CCDC28BQ9BUN5 200 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 TFB2MQ9H5Q4 396 aaKnown RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 TDP1Q9NUW8 608 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 TRPC5OSA6NMA1 111 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 MOSPD3O75425 235 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 VPS26AO75436 327 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 PRAMEF12O95522 483 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 EN2P19622 333 aaPredicted RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 EPHA3P29320 983 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 GKP32189 559 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 CTSOP43234 321 aaPredicted RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 PDCD2Q16342 344 aaPredicted RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 LSM12Q3MHD2 195 aaKnown RBP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 FRMD7Q6ZUT3 714 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 UBE2Q1Q7Z7E8 422 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 FBXO27Q8NI29 283 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 RHEBL1Q8TAI7 183 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 EXT2Q93063 718 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 L3HYPDHQ96EM0 354 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 BIRC8Q96P09 236 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 GPR21Q99679 349 aa24.57■■□□□ 1.52
DNMT3A-206ENST00000406659 MKI67P46013 3256 aaKnown RBP24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 CXorf51AA0A1B0GTR3 108 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 LINC01553A4QN01 128 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 XYLBO75191 536 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 SRCP12931 536 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 SNRPD1P62314 119 aaKnown RBP24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 XIAPP98170 497 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 NFKB2Q00653 900 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 NXNQ6DKJ4 435 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 RAB44Q7Z6P3 723 aaPredicted RBP24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 POU5F2Q8N7G0 328 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 OR2AP1Q8NGE2 309 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 TRMOQ9BU70 441 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 DERL2Q9GZP9 239 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 C1orf21Q9H246 121 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 DENND2DQ9H6A0 471 aaPredicted RBP24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 OAS3Q9Y6K5 1087 aaKnown RBP24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 DOCK6Q96HP0 2047 aa24.56■■□□□ 1.52
DNMT3A-206ENST00000406659 A0A0J9YYE9 177 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 GRM6O15303 877 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 OR1I1O60431 355 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 ZNF821O75541 412 aaPredicted RBP24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 TRBC1P01850 177 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 EPCAMP16422 314 aa24.55■■□□□ 1.52
DNMT3A-206ENST00000406659 SP100P23497 879 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms