RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CPA4Q9UI42 421 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 A0A087WXM4 84 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 OR51F1A6NGY5 319 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 TRIM64CA6NLI5 447 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 RPP40O75818 363 aaKnown RBP10.72□□□□□ -0.69
CLIP4-204ENST00000404424 GOT2P00505 430 aaKnown RBP10.72□□□□□ -0.69
CLIP4-204ENST00000404424 SLC4A1P02730 911 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 FCGR1AP12314 374 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 MTHFD2P13995 350 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 MYF6P23409 242 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 PCSK6P29122 969 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 HPCAP84074 193 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 RPS6KA2Q15349 733 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 PARP15Q460N3 678 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 VPS26BQ4G0F5 336 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 ZNF549Q6P9A3 640 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 ZNF354CQ86Y25 554 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 SCN4BQ8IWT1 228 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 FIBCD1Q8N539 461 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 BRSK1Q8TDC3 778 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 ADAMTS16Q8TE57 1224 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 ATOH8Q96SQ7 321 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 TRIM54Q9BYV2 358 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 POLR1EQ9GZS1 481 aaKnown RBP10.72□□□□□ -0.69
CLIP4-204ENST00000404424 SPON1Q9HCB6 807 aa10.72□□□□□ -0.69
CLIP4-204ENST00000404424 MRPL42Q9Y6G3 142 aaKnown RBP10.72□□□□□ -0.69
CLIP4-204ENST00000404424 A0A1B0GTW7 788 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 KANSL1LA0AUZ9 987 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 TYW5A2RUC4 315 aaKnown RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 GPIP06744 558 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 CDK4P11802 303 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 AKR1A1P14550 325 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 CAPN3P20807 821 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 SLC6A2P23975 617 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 TIAL1Q01085 375 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 IHHQ14623 411 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 PFKFB4Q16877 469 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 ALFQ53S48 1182 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 GDF6Q6KF10 455 aaPredicted RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 OGFOD2Q6N063 350 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 LPCAT2Q7L5N7 544 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 SPATA19Q7Z5L4 167 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 SERINC5Q86VE9 423 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 DDIASQ8IXT1 998 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 DCP1BQ8IZD4 617 aaKnown RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 RYBPQ8N488 228 aaPredicted RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 FAM47BQ8NA70 645 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 STAG3L4Q8TBR4 150 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 KIAA1191Q96A73 305 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 TUBGCP3Q96CW5 907 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 LRRC58Q96CX6 371 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 CENPNQ96H22 339 aaPredicted RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 FUBP3Q96I24 572 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 BTN2A3PQ96KV6 586 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 MYRFLQ96LU7 910 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 BIRC8Q96P09 236 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 AARSD1Q9BTE6 412 aaKnown RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 INTS10Q9NVR2 710 aaKnown RBP10.71□□□□□ -0.69
CLIP4-204ENST00000404424 PADI3Q9ULW8 664 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 KCTD3Q9Y597 815 aa10.71□□□□□ -0.69
CLIP4-204ENST00000404424 TANC1Q9C0D5 1861 aa10.71□□□□□ -0.7
CLIP4-204ENST00000404424 TTC24A2A3L6 582 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 IQCA1LA6NCM1 817 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 DRGXA6NNA5 263 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 ZNF701M0R085 212 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 UBXN8O00124 270 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 FXYD1O00168 92 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 CCL22O00626 93 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 RAMP2O60895 175 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 KERAO60938 352 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 DUSP11O75319 330 aaKnown RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 CNTN5O94779 1100 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 SIX3O95343 332 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 GFAPP14136 432 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 HGFP14210 728 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 YBEYP58557 167 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 ESRRGP62508 458 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 PLOD1Q02809 727 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 MERTKQ12866 999 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 LCP2Q13094 533 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 DCTN2Q13561 401 aaKnown RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 POLD3Q15054 466 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 OR4D1Q15615 310 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 EML3Q32P44 896 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 SLC39A12Q504Y0 691 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 PITRM1Q5JRX3 1037 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 EFL1Q7Z2Z2 1120 aaKnown RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 SPPL2CQ8IUH8 684 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 PGBD5Q8N414 524 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 PNPLA1Q8N8W4 532 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 OR4L1Q8NH43 312 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 EXT2Q93063 718 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 C8orf48Q96LL4 319 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 ZNF512Q96ME7 567 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-204ENST00000404424 CD320Q9NPF0 282 aa10.7□□□□□ -0.7
CLIP4-204ENST00000404424 CATSPERZQ9NTU4 200 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms