RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PXDC1Q5TGL8 231 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 GPR139Q6DWJ6 353 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SIGIRRQ6IA17 410 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 TYW3Q6IPR3 259 aaKnown RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZNF280DQ6N043 979 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SYCE2Q6PIF2 218 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SLC36A4Q6YBV0 504 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SCYL3Q8IZE3 742 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 APPL2Q8NEU8 664 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 OR2AK2Q8NG84 335 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SNRNP27Q8WVK2 155 aaKnown RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 RPL36ALQ969Q0 106 aaKnown RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 RHBDF1Q96CC6 855 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 RADILQ96JH8 1075 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 EBF3Q9H4W6 596 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 CATSPERBQ9H7T0 1116 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 CNGB3Q9NQW8 809 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 ARHGEF38Q9NXL2 777 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 WSB2Q9NYS7 404 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 CWC15Q9P013 229 aaKnown RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 SEC63Q9UGP8 760 aaKnown RBP3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLAGL1Q9UM63 463 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 PTGDR2Q9Y5Y4 395 aa3.93□□□□□ -1.78
HMGB1P17-201ENST00000403495 ARHGEF40Q8TER5 1519 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 DNAJC9-AS1A6NH13 148 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 CDRT15L2A8MXV6 281 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLRG1O43660 514 aaKnown RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLPP2O43688 288 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 DIAPH2O60879 1101 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 MITFO75030 526 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 GPC4O75487 556 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 VNN2O95498 520 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 MAOAP21397 527 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 LMO1P25800 156 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 ACADLP28330 430 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 HNRNPH1P31943 449 aaKnown RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 RPL3P39023 403 aaKnown RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 RASSF2P50749 326 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 UBXN2AP68543 259 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 TMF1P82094 1093 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 SRSF1Q07955 248 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 GRSF1Q12849 480 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 GPS2Q13227 327 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 ADIPOQQ15848 244 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 NTRK2Q16620 822 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 GARNL3Q5VVW2 1013 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZC3HC1Q86WB0 502 aaKnown RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 RNF168Q8IYW5 571 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 DSELQ8IZU8 1212 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 AADATQ8N5Z0 425 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 TMEM163Q8TC26 289 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 PIGOQ8TEQ8 1089 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 OIT3Q8WWZ8 545 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 SGCDQ92629 289 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 OTULINQ96BN8 352 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 TXNDC15Q96J42 360 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 CSF3RQ99062 836 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 PCYT2Q99447 389 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 SEPT5Q99719 369 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 AP1M1Q9BXS5 423 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 SLITRK6Q9H5Y7 841 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 MMP25Q9NPA2 562 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 CPSF2Q9P2I0 782 aaKnown RBP3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 GIMAP2Q9UG22 337 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZNF711Q9Y462 761 aa3.92□□□□□ -1.78
HMGB1P17-201ENST00000403495 A0A1B0GVM2 712 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 H3BNX3 289 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 PPEF2O14830 753 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 NDUFS7O75251 213 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 PSMD10O75832 226 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZWINTO95229 277 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 BCL10O95999 233 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 TRIM21P19474 475 aaKnown RBP3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 ITGB8P26012 769 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 SSTR2P30874 369 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 MSH2P43246 934 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 MXI1P50539 228 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 STAT2P52630 851 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 ABATP80404 500 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 MRPS5P82675 430 aaKnown RBP3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 ADORA2A-AS1P86434 159 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 KCNC3Q14003 757 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 PNLIPRP3Q17RR3 467 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 PCGF3Q3KNV8 242 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 DCAF6Q58WW2 860 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 ZNF805Q5CZA5 627 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 FSCBQ5H9T9 825 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 OTUD1Q5VV17 481 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 GGNBP1Q5YKI7 109 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 NSUN5P2Q63ZY6 315 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLEKHA7Q6IQ23 1121 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 NAA16Q6N069 864 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 DUS1LQ6P1R4 473 aaKnown RBP3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 TAOK1Q7L7X3 1001 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 PLPPR4Q7Z2D5 763 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 IRF2BP2Q7Z5L9 587 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 DNAAF5Q86Y56 855 aa3.91□□□□□ -1.78
HMGB1P17-201ENST00000403495 BEST3Q8N1M1 668 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms