RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 COLGALT2Q8IYK4 626 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 HMGCLL1Q8TB92 370 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ARRDC2Q8TBH0 407 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 TWIST2Q8WVJ9 160 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 WBP2Q969T9 261 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 CNDP1Q96KN2 507 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 TSPAN18Q96SJ8 248 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 SLC30A3Q99726 388 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 COQ10BQ9H8M1 238 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 TLR9Q9NR96 1032 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 VPS45Q9NRW7 570 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMC6-203ENST00000402989 CACNA2D2Q9NY47 1150 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 PDP2Q9P2J9 529 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 UBA2Q9UBT2 640 aaPredicted RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 EIF2B4Q9UI10 523 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 IKZF3Q9UKT9 509 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 USP22Q9UPT9 525 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 SCML2Q9UQR0 700 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 FCF1Q9Y324 198 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 Q9Y3F1 56 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ZNF236Q9UL36 1845 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 SCN10AQ9Y5Y9 1956 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ARHGEF37A1IGU5 675 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 H0Y626 953 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 INPP4BO15327 924 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 STX7O15400 261 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 TRIM16O95361 564 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ATXN1LP0C7T5 689 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 COL6A2P12110 1019 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 CORO1AP31146 461 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 HOXC8P31273 242 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 MC4RP32245 332 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 CHN2P52757 468 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 CDH15P55291 814 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 GNA12Q03113 381 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 STX5Q13190 355 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 TRIP4Q15650 581 aaPredicted RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 CNPY1Q3B7I2 92 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 TIGD2Q4W5G0 525 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 LIN52Q52LA3 116 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ZNF678Q5SXM1 525 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ARMC12Q5T9G4 340 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 PSAPL1Q6NUJ1 521 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 MSANTD2Q6P1R3 559 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 FUT10Q6P4F1 479 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 RBM44Q6ZP01 1051 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 FRA10AC1Q70Z53 315 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 SETD3Q86TU7 594 aaPredicted RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 PIANPQ8IYJ0 282 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 BBS5Q8N3I7 341 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 ZNF483Q8TF39 744 aaPredicted RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 DPF3Q92784 378 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 MTFMTQ96DP5 389 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 CCDC97Q96F63 343 aaPredicted RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 TMEM74Q96NL1 305 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 TMEM248Q9NWD8 314 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 UBAP1Q9NZ09 502 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 HACD3Q9P035 362 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 THEGQ9P2T0 379 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 CIDEBQ9UHD4 219 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 PRPF19Q9UMS4 504 aaKnown RBP4.35□□□□□ -1.71
SMC6-203ENST00000402989 AP4S1Q9Y587 144 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 PCDHB9Q9Y5E1 797 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 PCDHGA7Q9Y5G6 932 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 MYO9BQ13459 2157 aa4.35□□□□□ -1.71
SMC6-203ENST00000402989 KIAA0100Q14667 2235 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 CASP8AP2Q9UKL3 1982 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 RNF103-CHMP3A0A140T963 221 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 C2orf78A6NCI8 922 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SLC38A8A6NNN8 435 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 K7ERQ8 282 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 AZIN1O14977 448 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 NRP2O60462 931 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 NPHS1O60500 1241 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 RPP40O75818 363 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 CDK14O94921 469 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CNPP09543 421 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 PCNAP12004 261 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TYMPP19971 482 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 LEPRP48357 1165 aaKnown RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 ZNF135P52742 658 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 NDST2P52849 883 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ZNF177Q13360 481 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 NFYCQ13952 458 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 SQLEQ14534 574 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 ACAP2Q15057 778 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 AAK1Q2M2I8 961 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 RABL3Q5HYI8 236 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TBCELQ5QJ74 424 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 FAM45BPQ6NSW5 357 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 UGT3A1Q6NUS8 523 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 FAM151BQ6UXP7 276 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 TPGS1Q6ZTW0 290 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 RALGPS2Q86X27 583 aaPredicted RBP4.34□□□□□ -1.71
SMC6-203ENST00000402989 UMODL1-AS1Q8N2C9 162 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 CLDN19Q8N6F1 224 aa4.34□□□□□ -1.71
SMC6-203ENST00000402989 PCSK9Q8NBP7 692 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms