RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 DEFB128Q7Z7B8 93 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 MUC3BQ9H195 1237 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 VCX3BQ9H321 246 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 SYTL2Q9HCH5 934 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 ZDHHC7Q9NXF8 308 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 TAS2R13Q9NYV9 303 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 CCDC167Q9P0B6 97 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 DLGAP2Q9P1A6 1054 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 PSMD13Q9UNM6 376 aa16.91■□□□□ 0.3
DNMT3A-205ENST00000402667 CASQ2O14958 399 aaPredicted RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 NDUFS3O75489 264 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 SRP72O76094 671 aaKnown RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 CDK14O94921 469 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 CD160O95971 181 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 CDKN1CP49918 316 aaPredicted RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 PLD1Q13393 1074 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 MAPRE2Q15555 327 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 TAF12Q16514 161 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 KIAA1191Q96A73 305 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 SPDL1Q96EA4 605 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 C3orf30Q96M34 536 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 NR1H4Q96RI1 486 aaPredicted RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 TCF12Q99081 682 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 EBF3Q9H4W6 596 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 GPBP1L1Q9HC44 474 aaPredicted RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 MAGEA13PA6NCF6 341 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 FBP2O00757 339 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 FGF4P08620 206 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 LINGO3P0C6S8 592 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 LPOP22079 712 aaPredicted RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 LINGO4Q6UY18 593 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 PPP2R3CQ969Q6 453 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 C19orf60Q96EN9 201 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 ASB2Q96Q27 587 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 DERL2Q9GZP9 239 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 CCDC68Q9H2F9 335 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 VCXQ9H320 206 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 HIPK3Q9H422 1215 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 FBRSL1Q9HCM7 1045 aaKnown RBP16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 SCOCQ9UIL1 159 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 PCDHGA7Q9Y5G6 932 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 DNAJC15Q9Y5T4 150 aa16.9■□□□□ 0.3
DNMT3A-205ENST00000402667 ANKRD66B4E2M5 251 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 SNAP91O60641 907 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 GFAPP14136 432 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 HDCP19113 662 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 PSME3P61289 254 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 LRP8Q14114 963 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 MMEL1Q495T6 779 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 PQLC1Q8N2U9 271 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 PCDH20Q8N6Y1 951 aaKnown RBP16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 SNX31Q8N9S9 440 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 STAG3L4Q8TBR4 150 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 NSUN5Q96P11 429 aaKnown RBP16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 UNC93B1Q9H1C4 597 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 MID1IP1Q9NPA3 183 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 CACNA2D2Q9NY47 1150 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 BCAP29Q9UHQ4 241 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 IKZF3Q9UKT9 509 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 YIPF1Q9Y548 306 aa16.89■□□□□ 0.29
DNMT3A-205ENST00000402667 LCHNA4D1U4 455 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 KERAO60938 352 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 TMCC1O94876 653 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 C1RP00736 705 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 MYCP01106 439 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 MRPS22P82650 360 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 XIAPP98170 497 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 TRAF2Q12933 501 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 PTPRRQ15256 657 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 PTPRNQ16849 979 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 REP15Q6BDI9 236 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 PIANPQ8IYJ0 282 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 BHLHE22Q8NFJ8 381 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 BIRC8Q96P09 236 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 ADGRE3Q9BY15 652 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 SMPD4Q9NXE4 827 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 C6orf203Q9P0P8 240 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 GALPQ9UBC7 116 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 HSFX1Q9UBD0 423 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 FKBPLQ9UIM3 349 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 ANKRD36A6QL64 1941 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 ACOT8O14734 319 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 BCAS2O75934 225 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 SNRPB2P08579 225 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 AQP4P55087 323 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 FOXA1P55317 472 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 RAD51Q06609 339 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 TPGS2Q68CL5 300 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 PSAPL1Q6NUJ1 521 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 EFHBQ8N7U6 833 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 FAM156AQ8NDB6 213 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 TRMT2BQ96GJ1 504 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 GPR21Q99679 349 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 AKTIPQ9H8T0 292 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 RNF112Q9ULX5 631 aa16.88■□□□□ 0.29
DNMT3A-205ENST00000402667 SCAMP3O14828 347 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms