RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 KBTBD7Q8WVZ9 684 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 OXNAD1Q96HP4 312 aaPredicted RBP6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 RSRC1Q96IZ7 334 aaKnown RBP6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 C7orf26Q96N11 449 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 SAMD11Q96NU1 681 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 OLFM3Q96PB7 478 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 CSPG4P5Q96PW8 444 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 BTBD10Q9BSF8 475 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 EIF2AQ9BY44 585 aaKnown RBP6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 BRINP2Q9C0B6 783 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 DHX35Q9H5Z1 703 aaKnown RBP6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 PRDM16Q9HAZ2 1276 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 XAB2Q9HCS7 855 aaKnown RBP6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 MOCS1Q9NZB8 636 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 MFHAS1Q9Y4C4 1052 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 LRRC42Q9Y546 428 aa6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 FNDC1Q4ZHG4 1894 aaPredicted RBP6.87□□□□□ -1.31
CSNK2A1-204ENST00000400227 FAM237BA0A1B0GVD1 139 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CAPN14A8MX76 684 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 BIRC5O15392 142 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CCDC22O60826 627 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 SNNO75324 88 aaPredicted RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 KRT38O76015 456 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 RECQL4O94761 1208 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ALDH1A2O94788 518 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 LMNAP02545 664 aaKnown RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 BPGMP07738 259 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 GAAP10253 952 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 MYL2P10916 166 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 MLNP12872 115 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CCDC130P13994 396 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 DESP17661 470 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ADORA2BP29275 332 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 GCKP35557 465 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 FDFT1P37268 417 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 GRIA1P42261 906 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ACADSBP45954 432 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 LGALS4P56470 323 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CCNA1P78396 465 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CD69Q07108 199 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 NIPAL4Q0D2K0 466 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 BST1Q10588 318 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 DUSP8Q13202 625 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 SNAPC2Q13487 334 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 BMPR2Q13873 1038 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CRYMQ14894 314 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 DUSP28Q4G0W2 176 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 XKR4Q5GH76 650 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ANKRD20A2Q5SQ80 823 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 STXBP5Q5T5C0 1151 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ANKRD20A1Q5TYW2 823 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ANKRD20A3Q5VUR7 823 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 OTUD1Q5VV17 481 aaPredicted RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 ATG16L1Q676U5 607 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 TCTN3Q6NUS6 607 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 RFWD3Q6PCD5 774 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 C4orf50Q6ZRC1 276 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 GAREM2Q75VX8 874 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 STRADAQ7RTN6 431 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CATSPER4Q7RTX7 472 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 BNIPLQ7Z465 357 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 TTC7BQ86TV6 843 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 UNC5BQ8IZJ1 945 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 VPS52Q8N1B4 723 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 HSFY1Q96LI6 401 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 SPATA13Q96N96 652 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 NUDCD1Q96RS6 583 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 MECRQ9BV79 373 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 GCOM2Q9BZD3 368 aaPredicted RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 FBXO6Q9NRD1 293 aaPredicted RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 GDAP2Q9NXN4 497 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.86□□□□□ -1.311e-9■■■■■ 69.5
CSNK2A1-204ENST00000400227 RCOR3Q9P2K3 495 aaPredicted RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 EVLQ9UI08 416 aaPredicted RBP6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 FZD10Q9ULW2 581 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 CDY2AQ9Y6F7 541 aa6.86□□□□□ -1.31
CSNK2A1-204ENST00000400227 RRN3P2A6NIE6 340 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 A8MXQ7 604 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 PATE3B3GLJ2 98 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 I3L4J1 428 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 CYB561D2O14569 222 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 DAB1O75553 588 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 LY86O95711 162 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 GSRP00390 522 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 RARBP10826 455 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NEFHP12036 1026 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 DARSP14868 501 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 KCNE1P15382 129 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 GOT1P17174 413 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 WARSP23381 471 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 LMO2P25791 158 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 CNTFP26441 200 aa6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 TKTP29401 623 aaKnown RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 GNL1P36915 607 aaPredicted RBP6.85□□□□□ -1.31
CSNK2A1-204ENST00000400227 NRG3P56975 720 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms