RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PDSS1Q5T2R2 415 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 C9orf64Q5T6V5 341 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 TTI2Q6NXR4 508 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CHERPQ8IWX8 916 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ZBTB10Q96DT7 871 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 KXD1Q9BQD3 176 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ACE2Q9BYF1 805 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 FKBP14Q9NWM8 211 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 NUP50Q9UKX7 468 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 INPPL1O15357 1258 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 LDB2O43679 373 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 BMP7P18075 431 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 OMPP47874 163 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 FSTL1Q12841 308 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 SEL1L3Q68CR1 1132 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 BEND5Q7L4P6 421 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 PHC3Q8NDX5 983 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 FRS2Q8WU20 508 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 TIFAQ96CG3 184 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ZBTB45Q96K62 511 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ADAM28Q9UKQ2 775 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 BTNL10A8MVZ5 291 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 E2F3O00716 465 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 FFAR3O14843 346 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 GPR42O15529 346 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 RPL17P18621 184 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 PSMD4P55036 377 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ARHGAP40Q5TG30 622 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CREG2Q8IUH2 290 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 DENND6BQ8NEG7 585 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF518BQ9C0D4 1074 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 STX16-NPEPL1H3BU86 382 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 STX16O14662 325 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 PIRTP0C851 137 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 KCNJ2P63252 427 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 Q4G0T1 1027 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 AFTPHQ6ULP2 937 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CFAP206Q8IYR0 622 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ARL14EPQ8N8R7 260 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ZBTB8BQ8NAP8 495 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 TRAPPC9Q96Q05 1148 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 SEMA4BQ9NPR2 832 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 MAGEB16A2A368 324 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 ADRM1Q16186 407 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 AUTS2Q8WXX7 1259 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 FAM111AQ96PZ2 611 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 AP1M2Q9Y6Q5 423 aa10.95□□□□□ -0.66
CACNA1C-216ENST00000399638 TMEM150CB9EJG8 249 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 FAM228BP0C875 321 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 CCNOP22674 350 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RCVRNP35243 200 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 COILP38432 576 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 PPP2R2BQ00005 443 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 MAPK14Q16539 360 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RBM18Q96H35 190 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 SEPHS2Q99611 448 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 BTBD7Q9P203 1132 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 OR12D3Q9UGF7 316 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 TRHDEQ9UKU6 1024 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 AGLP35573 1532 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 HSPA13P48723 471 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC6A3Q01959 620 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 KCT2Q8NC54 265 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 OR4A15Q8NGL6 344 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RIOK2Q9BVS4 552 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 FRMD8P1Q9BZ68 369 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 BTBD1Q9H0C5 482 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 THAP2Q9H0W7 228 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 POMKQ9H5K3 350 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 MARCH7Q9H992 704 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RXFP1Q9HBX9 757 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 COG5Q9UP83 839 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 KCNK1O00180 336 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 TUBG1P23258 451 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 KLK7P49862 253 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 NR1D2Q14995 579 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 NEDD8Q15843 81 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 RIPOR1Q6ZS17 1223 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZCCHC7Q8N3Z6 543 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 GSDMCQ9BYG8 508 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 CDH19Q9H159 772 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 LHX5Q9H2C1 402 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 TLR9Q9NR96 1032 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZSCAN5CA6NGD5 496 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF132P52740 706 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms