RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 UBA6A0AVT1 1052 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 ILVBLA1L0T0 632 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 AZIN1O14977 448 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 AP1G1O43747 822 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 SIX3O95343 332 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 FESP07332 822 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 C8BP07358 591 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 GFAPP14136 432 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 HDCP19113 662 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 CR2P20023 1033 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 GPX3P22352 226 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 HOXD10P28358 340 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 RGRP47804 291 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 SCNN1BP51168 640 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 CHN2P52757 468 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 ATXN3P54252 364 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 ATP6V0D1P61421 351 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 RPS24P62847 133 aaKnown RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 GPNMBQ14956 572 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 C8orf82Q6P1X6 216 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 FBXL19Q6PCT2 694 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 UGT2A3Q6UWM9 527 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 OR4K2Q8NGD2 314 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 LPGAT1Q92604 370 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 ZNF512Q96ME7 567 aaPredicted RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 NSMCE3Q96MG7 304 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 FBRSL1Q9HCM7 1045 aaKnown RBP13.66□□□□□ -0.22
PTPN6-202ENST00000399448 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 CD300AQ9UGN4 299 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 RAB26Q9ULW5 256 aa13.66□□□□□ -0.22
PTPN6-202ENST00000399448 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 C2orf81A6NN90 581 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 HOXA2O43364 376 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 AHCYL1O43865 530 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 KERAO60938 352 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 NDUFS3O75489 264 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 MT-CO1P00395 513 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PRSS56P0CW18 603 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 FMO4P31512 558 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 RAD51Q06609 339 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 CYTH1Q15438 398 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 SAMD4BQ5PRF9 694 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 KANK2Q63ZY3 851 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 LHX8Q68G74 356 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PAQR3Q6TCH7 311 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PRSS55Q6UWB4 352 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 GLT6D1Q7Z4J2 308 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 DENND1CQ8IV53 801 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 FUNDC1Q8IVP5 155 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 OVCA2Q8WZ82 227 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 MRPL9Q9BYD2 267 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TMEM181Q9P2C4 612 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 ZNF840PA6NDX5 716 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PRORSD1PA6NEY8 169 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 LRRC14BA6NHZ5 514 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 BBIP1A8MTZ0 92 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PPP6CO00743 305 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 DNAJA2O60884 412 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 SRP72O76094 671 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 GJB5O95377 273 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PRLP01236 227 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 RHOCP08134 193 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 ALDOCP09972 364 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 RHDQ02161 417 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 BFSP2Q13515 415 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TLR1Q15399 786 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 SETMARQ53H47 684 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TMEM102Q8N9M5 508 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PCYOX1LQ8NBM8 494 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 MDGA1Q8NFP4 955 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 OR9I1Q8NGQ6 314 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TWIST2Q8WVJ9 160 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 SEPT8Q92599 483 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PLD4Q96BZ4 506 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 HHIPL1Q96JK4 782 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 CENPKQ9BS16 269 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TDRD1Q9BXT4 1180 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 SLC24A3Q9HC58 644 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 AGO1Q9UL18 857 aaKnown RBP13.65□□□□□ -0.22
PTPN6-202ENST00000399448 RNF112Q9ULX5 631 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 VPS9D1Q9Y2B5 631 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 MED16Q9Y2X0 877 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 CHD5Q8TDI0 1954 aa13.65□□□□□ -0.22
PTPN6-202ENST00000399448 ENO4A6NNW6 628 aa13.64□□□□□ -0.23
PTPN6-202ENST00000399448 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
PTPN6-202ENST00000399448 ADAM12O43184 909 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms