RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TRIM62Q9BVG3 475 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PHF7Q9BWX1 381 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 TFB2MQ9H5Q4 396 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 SH3BP4Q9P0V3 963 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 BAIAP2L1Q9UHR4 511 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 UBIAD1Q9Y5Z9 338 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 HTTP42858 3142 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 ADM5C9JUS6 153 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 ST8SIA5O15466 376 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 DDAH2O95865 285 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 LIPFP07098 398 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 TMEM253P0C7T8 217 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PRKCAP17252 672 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTPRAP18433 802 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PCSK1P29120 753 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 POLE2P56282 527 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PSMC5P62195 406 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTP4A2Q12974 167 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCDC14Q49A88 953 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PITRM1Q5JRX3 1037 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 LIN9Q5TKA1 542 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 TXNRD3NBQ6F5E7 133 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 STXBP4Q6ZWJ1 553 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 TAS2R42Q7RTR8 314 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 APOBEC3FQ8IUX4 373 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 DDIASQ8IXT1 998 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 OR8K5Q8NH50 307 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 NFKBIDQ8NI38 313 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■■■■■ 33
TRAPPC13-202ENST00000399438 DUSP19Q8WTR2 217 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 LRRC46Q96FV0 321 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZDHHC12Q96GR4 267 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 TUBGCP5Q96RT8 1024 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 GPR62Q9BZJ7 368 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 NRDE2Q9H7Z3 1164 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 RC3H2Q9HBD1 1191 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 APOBEC3GQ9HC16 384 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 ABCB8Q9NUT2 735 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 NXF1Q9UBU9 619 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 DERAQ9Y315 318 aa6.24□□□□□ -1.41
TRAPPC13-202ENST00000399438 FAM170BA6NMN3 283 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZNF879B4DU55 563 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 GOLGA8KD6RF30 607 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 OR5F1O95221 314 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 GLAP06280 429 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 HSPA8P11142 646 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ETV3P41162 512 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 BMXP51813 675 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 RPL7AP62424 266 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 USP10Q14694 798 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ANKRD20A4Q4UJ75 823 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ANKRD20A8PQ5CZ79 823 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ANKRD20A2Q5SQ80 823 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZNF697Q5TEC3 545 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ANKRD20A1Q5TYW2 823 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ANKRD20A3Q5VUR7 823 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CRELD2Q6UXH1 353 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 GADL1Q6ZQY3 521 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CXorf67Q86X51 503 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 OR2T34Q8NGX1 318 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 MYCBPAPQ8TBZ2 947 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 BCL7CQ8WUZ0 217 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 NRG4Q8WWG1 115 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CAVIN3Q969G5 261 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 LRRC39Q96DD0 335 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 SMC6Q96SB8 1091 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCT8L2Q96SF2 557 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 RIT2Q99578 217 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZFYVE21Q9BQ24 234 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 JPH1Q9HDC5 661 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 PALMDQ9NP74 551 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 FKBP14Q9NWM8 211 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 RAB20Q9NX57 234 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CFAP97Q9P2B7 532 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 TMEM59LQ9UK28 342 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 NOCTQ9UK39 431 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CROTQ9UKG9 612 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 GAB2Q9UQC2 676 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 PCDHB4Q9Y5E5 795 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 PCDHA10Q9Y5I2 948 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 BZW2Q9Y6E2 419 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 GREB1LQ9C091 1923 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 B4GALT5O43286 388 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 OR2C1O95371 312 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 HLA-DRAP01903 254 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 MT-ND5P03915 603 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 IVLP07476 585 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 KRT19P08727 400 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CPN2P22792 545 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 FSHRP23945 695 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCR10P46092 362 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 STARP49675 285 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 HK3P52790 923 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 MANFP55145 182 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 MAP3K7CLP57077 242 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 TAS2R40P59535 323 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 GPC5P78333 572 aa6.23□□□□□ -1.41
TRAPPC13-202ENST00000399438 TFAMQ00059 246 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms