RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 TMEM88BA6NKF7 163 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 ATP6AP2O75787 350 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 RHOBTB1O94844 696 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 ALDOCP09972 364 aaKnown RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 GFAPP14136 432 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 GSTT1P30711 240 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 GRIA2P42262 883 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CDH4P55283 916 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 ELAVL2Q12926 359 aaKnown RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 PFKFB4Q16877 469 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 KIF19Q2TAC6 998 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 RNF19BQ6ZMZ0 732 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 FUNDC1Q8IVP5 155 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CYP2S1Q96SQ9 504 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 HOPXQ9BPY8 73 aaPredicted RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CINPQ9BW66 212 aaPredicted RBP23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 CCDC68Q9H2F9 335 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 UBAP1Q9NZ09 502 aa23.03■■□□□ 1.28
RABGGTA-202ENST00000399409 TBC1D4O60343 1298 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 TNFAIP8O95379 198 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 ALDH2P05091 517 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 SMIM18P0DKX4 95 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 CES1P23141 567 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 RAD51Q06609 339 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 TAF1AQ15573 450 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 MAP7D1Q3KQU3 841 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 MIER2Q8N344 545 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 UHRF1Q96T88 793 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 TTLL2Q9BWV7 592 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 CRISPLD1Q9H336 500 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 ZNF696Q9H7X3 374 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 FBRSL1Q9HCM7 1045 aaKnown RBP23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 DNMT3LQ9UJW3 386 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 VPS9D1Q9Y2B5 631 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 ANKRD36A6QL64 1941 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 LCHNA4D1U4 455 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 SLC38A8A6NNN8 435 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 H3BMM5 538 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 KDELR3O43731 214 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 VNN2O95498 520 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 PIRTP0C851 137 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 SLC11A2P49281 568 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 KCNQ1P51787 676 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 SH3BGRP55822 239 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 RALGDSQ12967 914 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 GEN1Q17RS7 908 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 IL31Q6EBC2 164 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 CFAP52Q8N1V2 620 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 OR9I1Q8NGQ6 314 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 EME1Q96AY2 570 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 SH3GL3Q99963 347 aa23.02■■□□□ 1.28
RABGGTA-202ENST00000399409 GREB1Q4ZG55 1949 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 A0A0D9SEW6 157 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 A0A0J9YYE9 177 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 SYCE1LA8MT33 242 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 PIP5K1BO14986 540 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 SIX3O95343 332 aaPredicted RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 MT-CO1P00395 513 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 ELNP15502 786 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 LBPP18428 481 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 OXCT1P55809 520 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 LCP2Q13094 533 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 FBXO39Q8N4B4 442 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 ZFRQ96KR1 1074 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 B3GALT6Q96L58 329 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 RNF112Q9ULX5 631 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 COMMD3-BMI1R4GMX3 469 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 THSD7BQ9C0I4 1608 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 CLASP2O75122 1294 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 NDUFS3O75489 264 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 MATN4O95460 622 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 ZNF26P17031 533 aaPredicted RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 SLC6A4P31645 630 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 ATP5C1P36542 298 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 RPL5P46777 297 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 LAYNQ6UX15 382 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 DHFR2Q86XF0 187 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 GALNT4Q8N4A0 578 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 NKAPQ8N5F7 415 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 OR7D4Q8NG98 312 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 CEP295NLQ96MC4 621 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 GPATCH1Q9BRR8 931 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 MRPS26Q9BYN8 205 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 MARCH5Q9NX47 278 aa23.01■■□□□ 1.27
RABGGTA-202ENST00000399409 UBA6A0AVT1 1052 aaPredicted RBP23■■□□□ 1.27
RABGGTA-202ENST00000399409 C2orf81A6NN90 581 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 SUPT3HB4E1H0 165 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 INSIG1O15503 277 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 SUPT3HO75486 399 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 FAM58BPP0C7Q3 252 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 SLC7A2P52569 658 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 C6orf10Q5SRN2 563 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 FUT10Q6P4F1 479 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 EFL1Q7Z2Z2 1120 aaKnown RBP23■■□□□ 1.27
RABGGTA-202ENST00000399409 PHYKPLQ8IUZ5 450 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 ZUFSPQ96AP4 578 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 CNBD2Q96M20 576 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 TMCO1Q9UM00 188 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 PCDHB7Q9Y5E2 793 aa23■■□□□ 1.27
RABGGTA-202ENST00000399409 SPO11Q9Y5K1 396 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms