RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PRLP01236 227 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 CEACAM5P06731 702 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 PYGLP06737 847 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 TNNT1P13805 278 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 COMTP21964 271 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 MAGEA1P43355 309 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 NOP2P46087 812 aaKnown RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 STC1P52823 247 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 IFI35P80217 286 aaPredicted RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 PTSQ03393 145 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 AP1B1Q10567 949 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 IHHQ14623 411 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 ZNF765Q7L2R6 523 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 NLRP8Q86W28 1048 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 RFX6Q8HWS3 928 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 TC2NQ8N9U0 490 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 GPR156Q8NFN8 814 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 WBP1Q96G27 269 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 ATXN7L3BQ96GX2 97 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 NAF1Q96HR8 494 aaKnown RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 ZNF578Q96N58 590 aaPredicted RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 SMIM14Q96QK8 99 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 SUDS3Q9H7L9 328 aaPredicted RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 CD84Q9UIB8 345 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 ENTPD2Q9Y5L3 495 aa13.37□□□□□ -0.27
VCX3A-202ENST00000398729 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
VCX3A-202ENST00000398729 B4DGG1 531 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 PYCARD-AS1I3L0S3 204 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 NTN3O00634 580 aaPredicted RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 DXOO77932 396 aaKnown RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 GLB1P16278 677 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 CD86P42081 329 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 GNPDA1P46926 289 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 HADHBP55084 474 aaKnown RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ERVPABLB-1P60509 514 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 DYNLT1P63172 113 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ILF3Q12906 894 aaKnown RBP eCLIP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ZBTB17Q13105 803 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 SPA17Q15506 151 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 C3orf38Q5JPI3 329 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 OGFOD3Q6PK18 319 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 RFLNAQ6ZTI6 216 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 RAVER1Q8IY67 606 aaKnown RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 NRSN1Q8IZ57 195 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 CNTD1Q8N815 330 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 CCL4L1Q8NHW4 92 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 KIAA1524Q8TCG1 905 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 GPBAR1Q8TDU6 330 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 GFM1Q96RP9 751 aaKnown RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 LYSMD1Q96S90 227 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ADGRE3Q9BY15 652 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 BRD8Q9H0E9 1235 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 LUC7LQ9NQ29 371 aaKnown RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 TRNAU1APQ9NX07 287 aaKnown RBP13.36□□□□□ -0.27
VCX3A-202ENST00000398729 SEPT10Q9P0V9 454 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 RABGEF1Q9UJ41 708 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 SUFUQ9UMX1 484 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 SATB2Q9UPW6 733 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 SLC17A4Q9Y2C5 497 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
VCX3A-202ENST00000398729 TLN1Q9Y490 2541 aaKnown RBP13.35□□□□□ -0.27
VCX3A-202ENST00000398729 C1orf232A0A0U1RR37 186 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 PSTPIP1O43586 416 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 NOBOXO60393 691 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 CLDN7O95471 211 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 SOD1P00441 154 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 IVLP07476 585 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 MMP2P08253 660 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 PNLIPP16233 465 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 RBMS1P29558 406 aaKnown RBP13.35□□□□□ -0.27
VCX3A-202ENST00000398729 NR2C2P49116 596 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
VCX3A-202ENST00000398729 CCL7P80098 99 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 SKOR1P84550 965 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 PEX6Q13608 980 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 TFDP2Q14188 446 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 LY6DQ14210 128 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 C14orf28Q4W4Y0 310 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-202ENST00000398729 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 DOK6Q6PKX4 331 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 NPNTQ6UXI9 565 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 ADAMTSL4Q6UY14 1074 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 BZW1Q7L1Q6 419 aaKnown RBP13.35□□□□□ -0.27
VCX3A-202ENST00000398729 CCDC170Q8IYT3 715 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
VCX3A-202ENST00000398729 TTC9Q92623 222 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms