RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 ANXA11P50995 505 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 ECT2LQ008S8 904 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 CRY1Q16526 586 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 PLEKHG4Q58EX7 1191 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 ZNF57Q68EA5 555 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 CARNMT1Q8N4J0 409 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 MTFMTQ96DP5 389 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 FIZ1Q96SL8 496 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 SLC9A7Q96T83 725 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 GPR20Q99678 358 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 MLPHQ9BV36 600 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 IPPQ9Y573 584 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 GMEB1Q9Y692 573 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 MSCO60682 206 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 LRIG2O94898 1065 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 MT-CYBP00156 380 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 NCK1P16333 377 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 GPR15P49685 360 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 ENTPD1P49961 510 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 OLR1P78380 273 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 AP5B1Q2VPB7 878 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 CGB2Q6NT52 195 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 CAND1Q86VP6 1230 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 TBC1D19Q8N5T2 526 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 ZBTB8BQ8NAP8 495 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 GATA6Q92908 595 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 C12orf43Q96C57 262 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 TDRD1Q9BXT4 1180 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 HMGXB4Q9UGU5 601 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 PADI4Q9UM07 663 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 SNX6Q9UNH7 406 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 FZD1Q9UP38 647 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 SLC28A1O00337 649 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 DPYSL4O14531 572 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 RFXANKO14593 260 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 FADS2O95864 444 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 IGFBP5P24593 272 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 CYP4F2P78329 520 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 CYP4F3Q08477 520 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 IKBKEQ14164 716 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 TLR1Q15399 786 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 ZCCHC8Q6NZY4 707 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 PLEKHH3Q7Z736 793 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 LINGO1Q96FE5 620 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 PGLYRP2Q96PD5 576 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 TWNKQ96RR1 684 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 TRPM5Q9NZQ8 1165 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 ZDHHC2Q9UIJ5 367 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.04□□□□□ -0.64
HPS4-202ENST00000398145 POLR3HQ9Y535 204 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 MYH11P35749 1972 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 MYH3P11055 1940 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 CCDC162PA2VCL2 907 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 PIP5K1BO14986 540 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 TMCC2O75069 709 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 TSPAN19P0C672 248 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CCNCP24863 283 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 ICAM3P32942 547 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 NRG1Q02297 640 aaPredicted RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 CLCQ05315 142 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 BOP1Q14137 746 aaKnown RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 CARTPTQ16568 116 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SLC10A6Q3KNW5 377 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 XKR5Q6UX68 686 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 KLHL5Q96PQ7 755 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SYT11Q9BT88 431 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 MKS1Q9NXB0 559 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 ELOVL7A1L3X0 281 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CCDC182A6NF36 153 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 LSM1O15116 133 aaKnown RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 TPTEP56180 551 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 IRF8Q02556 426 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 GNA12Q03113 381 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CPSF6Q16630 551 aaKnown RBP eCLIP11.03□□□□□ -0.64
HPS4-202ENST00000398145 RAP1GAP2Q684P5 730 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 LDB1Q86U70 411 aaPredicted RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 PANX1Q96RD7 426 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 PDZD7Q9H5P4 517 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 TBCCD1Q9NVR7 557 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 IFT80Q9P2H3 777 aaPredicted RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 ZNHIT2Q9UHR6 403 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 FZD10Q9ULW2 581 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 SAMD4AQ9UPU9 718 aaKnown RBP11.03□□□□□ -0.64
HPS4-202ENST00000398145 ERGIC3Q9Y282 383 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 WDR37Q9Y2I8 494 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 GSTK1Q9Y2Q3 226 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 NRCAMQ92823 1304 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 LOC110117498-PIK3R3F6TDL0 507 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 DLX3O60479 287 aa11.03□□□□□ -0.64
HPS4-202ENST00000398145 NDUFS2O75306 463 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms