RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SUPT7LO94864 414 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SOX30O94993 753 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 UMPSP11172 480 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PLEKHS1Q5SXH7 462 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 USP45Q70EL2 814 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SPATA19Q7Z5L4 167 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NRSN1Q8IZ57 195 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 IPMKQ8NFU5 416 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 OR6P1Q8NGX9 317 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PTCD3Q96EY7 689 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PRKAG2Q9UGJ0 569 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CCDC88CQ9P219 2028 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 EP300Q09472 2414 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PGLSO95336 258 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CKMP06732 381 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CYP2A6P11509 494 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PPIBP23284 216 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 HNF4AP41235 474 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ELF3P78545 371 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 DLG1Q12959 904 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PRKG2Q13237 762 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 MRPL43Q8N983 215 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 DEFB118Q96PH6 123 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ANLNQ9NQW6 1124 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 VPS51Q9UID3 782 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 A0A0J9YYE9 177 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 A0A1W2PPM1 405 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 GRM6O15303 877 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CD3EAPO15446 510 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TRBC1P01850 177 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ATF6P18850 670 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SLC1A6P48664 564 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 LIG3P49916 1009 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 STX1BP61266 288 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 WDR5P61964 334 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CDH18Q13634 790 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CHI3L2Q15782 390 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TMC7Q7Z402 723 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NXPE1Q8N323 547 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 LENG1Q96BZ8 264 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SORT1Q99523 831 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NMUR2Q9GZQ4 415 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SUCOQ9UBS9 1254 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ARHGEF17Q96PE2 2063 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ITGB1P05556 798 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 T-ENOLP0DO92 83 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 AVPR1AP37288 418 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 RPA4Q13156 261 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 AVL9Q8NBF6 648 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 FAM13CQ8NE31 585 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SUDS3Q9H7L9 328 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ABCF3Q9NUQ8 709 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TMEM216Q9P0N5 145 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PTBP2Q9UKA9 531 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 KIF26AQ9ULI4 1882 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CACNB4O00305 520 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 GPC4O75487 556 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NFATC1O95644 943 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 C8GP07360 202 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PRPS2P11908 318 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 HSD17B1P14061 328 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TTKP33981 857 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 OR56A4Q8NGH8 313 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 COPS8Q99627 209 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 GORASP1Q9BQQ3 440 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PAAF1Q9BRP4 392 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ZSCAN5AQ9BUG6 496 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CLPBQ9H078 707 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 MEAF6Q9HAF1 191 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PRDM10Q9NQV6 1147 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TMEM39AQ9NV64 488 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 XPR1Q9UBH6 696 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SLC39A10Q9ULF5 831 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SCML1Q9UN30 329 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PSAT1Q9Y617 370 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 B4GALT3O60512 393 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 PMPCBO75439 489 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 LRG1P02750 347 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 PRNPP04156 253 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 PTPN2P17706 415 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CORO1AP31146 461 aaKnown RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 AQP5P55064 265 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ALFQ53S48 1182 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CGB2Q6NT52 195 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 RASSF3Q86WH2 238 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 MIB1Q86YT6 1006 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 MINDY1Q8N5J2 469 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 PPP3R2Q96LZ3 170 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 FICDQ9BVA6 458 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 NOD2Q9HC29 1040 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 HEBP1Q9NRV9 189 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 GID8Q9NWU2 228 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 SLC17A7Q9P2U7 560 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 GNPTGQ9UJJ9 305 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 KDM1AO60341 852 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 DPM1O60762 260 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 KLKB1P03952 638 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms