RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IMP4Q96G21 291 aaKnown RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 AHCYL2Q96HN2 611 aaKnown RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 HGH1Q9BTY7 390 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 YIPF2Q9BWQ6 316 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 NUF2Q9BZD4 464 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 RASSF4Q9H2L5 321 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 ECT2Q9H8V3 914 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 WDR41Q9HAD4 459 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 CD84Q9UIB8 345 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 COL11A1P12107 1806 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 HHLA1C9JL84 531 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 CCL22O00626 93 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 GNGT2O14610 69 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 SLC31A1O15431 190 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 F11P03951 625 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 IDSP22304 550 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 NAGLUP54802 743 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 AQP5P55064 265 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 WASHC5Q12768 1159 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 SLC10A2Q12908 348 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 CAPRIN1Q14444 709 aaKnown RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 ELAVL3Q14576 367 aaKnown RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 C9orf50Q5SZB4 431 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 CMC1Q7Z7K0 106 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 TDRPQ86YL5 185 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 GALNT13Q8IUC8 556 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 PTGR2Q8N8N7 351 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 ATXN2LQ8WWM7 1075 aaKnown RBP8.26□□□□□ -1.09
PTPRD-204ENST00000397606 IL12RB2Q99665 862 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 RNF38Q9H0F5 515 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 FBXL12Q9NXK8 326 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 ARL5AQ9Y689 179 aa8.26□□□□□ -1.09
PTPRD-204ENST00000397606 LCHNA4D1U4 455 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 DRGXA6NNA5 263 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 H3BM21 787 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ENO1P06733 434 aaKnown RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 KRT16P08779 473 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 PCNAP12004 261 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 EPB42P16452 691 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 GRIA1P42261 906 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ARMC3Q5W041 872 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CNSTQ6PJW8 725 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 EXOC3L1Q86VI1 746 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 NPWQ8N729 165 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF75CPQ92670 426 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 UBE2E3Q969T4 207 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 NUS1Q96E22 293 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CDKN2AIPNLQ96HQ2 116 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ZSCAN5AQ9BUG6 496 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 IL1RAPL1Q9NZN1 696 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 XPR1Q9UBH6 696 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 RABGEF1Q9UJ41 708 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 KIAA1217Q5T5P2 1943 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 TCRBV7S3A2A0A539 114 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 TTC24A2A3L6 582 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 MLYCDO95822 493 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CXCR2P25025 360 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 IRS1P35568 1242 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 IRF8Q02556 426 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 BTKQ06187 659 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ABRQ12979 859 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 STX5Q13190 355 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 NR6A1Q15406 480 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 SPDYE7PQ495Y7 208 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 FBXO43Q4G163 708 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 TRIM68Q6AZZ1 485 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 TRPM8Q7Z2W7 1104 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 LYSMD3Q7Z3D4 306 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ARFGAP1Q8N6T3 406 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 SLC39A13Q96H72 371 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 MAGEB10Q96LZ2 347 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 BTBD1Q9H0C5 482 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 LINC00597Q9H2U6 94 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 SPATS2LQ9NUQ6 558 aaKnown RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 GID8Q9NWU2 228 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 PIAS3Q9Y6X2 628 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CCDC162PA2VCL2 907 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 TMEM114B3SHH9 223 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 BIRC5O15392 142 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ALPIP09923 528 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 HLA-EP13747 358 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 SLC2A4P14672 509 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 MPP1Q00013 466 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ILF3Q12906 894 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 MAD2L1Q13257 205 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 PTK2BQ14289 1009 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 TTMPQ5BVD1 217 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 LRRC73Q5JTD7 316 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 ZBTB2Q8N680 514 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 OR13C4Q8NGS5 318 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 NLNQ9BYT8 704 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CAB39LQ9H9S4 337 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 POLG2Q9UHN1 485 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 PAPSS2O95340 614 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 OAS1P00973 400 aaKnown RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 AMD1P17707 334 aa8.25□□□□□ -1.09
PTPRD-204ENST00000397606 MAT2AP31153 395 aaKnown RBP8.25□□□□□ -1.09
PTPRD-204ENST00000397606 CLCN4P51793 760 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms