RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SLC22A1O15245 554 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ASNA1O43681 348 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 DAB1O75553 588 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 STAU1O95793 577 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 THP07101 528 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 XRCC1P18887 633 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 GRK2P25098 689 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CNTFP26441 200 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 HOXD10P28358 340 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SERPINB1P30740 379 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 HPCAL1P37235 193 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CLK3P49761 638 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 THOP1P52888 689 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PHC1P78364 1004 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GALNT2Q10471 571 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PMS2P3Q13401 168 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 FXNQ16595 210 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PPP1R3AQ16821 1122 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GEN1Q17RS7 908 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CCDC58Q4VC31 144 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TIGD5Q53EQ6 642 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SPANXN3Q5MJ09 141 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RBM20Q5T481 1227 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 ATAD3BQ5T9A4 648 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 STEAP4Q687X5 459 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SEL1L3Q68CR1 1132 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TMEM135Q86UB9 458 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ZBTB46Q86UZ6 589 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MFSD6LQ8IWD5 586 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ZC3H7AQ8IWR0 971 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 LSMEM2Q8N112 164 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SH3RF2Q8TEC5 729 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TANKQ92844 425 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MYLPFQ96A32 169 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TRPV6Q9H1D0 765 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 POLR1BQ9H9Y6 1135 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ARMC1Q9NVT9 282 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GIMAP2Q9UG22 337 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 FBXW11Q9UKB1 542 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TRAF6Q9Y4K3 522 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PLXNA1Q9UIW2 1896 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ARL5CA6NH57 179 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ZSCAN5BA6NJL1 495 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 FAM155AB1AL88 458 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 TAF4O00268 1085 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RNASEH2AO75792 299 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 SOAT2O75908 522 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SBK3P0C264 359 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MLNP12872 115 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ME2P23368 584 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CXCR2P25025 360 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GRIK1P39086 918 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 DPP6P42658 865 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TMBIM6P55061 237 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CDH13P55290 713 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ARPP19P56211 112 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GNG2P59768 71 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 STX1BP61266 288 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MS4A2Q01362 244 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RALGDSQ12967 914 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PGS1Q32NB8 556 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GNASQ5JWF2 1037 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CLEC6AQ6EIG7 209 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CNSTQ6PJW8 725 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 EPGNQ6UW88 154 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TIFABQ6ZNK6 161 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GK5Q6ZS86 529 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PLEKHH3Q7Z736 793 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 LRRTM3Q86VH5 581 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 DSELQ8IZU8 1212 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 Q8N9G6 341 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 KYQ8NBH2 561 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 OR9I1Q8NGQ6 314 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 OR6P1Q8NGX9 317 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 HCAR2Q8TDS4 363 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ATL1Q8WXF7 558 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 S100ZQ8WXG8 99 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 MS4A4AQ96JQ5 239 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CNDP2Q96KP4 475 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 YME1L1Q96TA2 773 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 GMPR2Q9P2T1 348 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 VPS28Q9UK41 221 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 PCDHB12Q9Y5F1 795 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 ST14Q9Y5Y6 855 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CDY2AQ9Y6F7 541 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 CDY1Q9Y6F8 540 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 FAM95CA0A1B0GW59 222 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 C17orf102A2RUQ5 167 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 RRN3P2A6NIE6 340 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 KCNU1A8MYU2 1149 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 SCAMP3O14828 347 aaKnown RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 HTRA2O43464 458 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 DLX3O60479 287 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TSPAN3O60637 253 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 DEAF1O75398 565 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 JRKO75564 520 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 BCAS2O75934 225 aaPredicted RBP5.02□□□□□ -1.61
SSR1-202ENST00000397511 ALX3O95076 343 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 TBX18O95935 607 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 F2P00734 622 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms