RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PRAMEF1O95521 474 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 ZNF30P17039 623 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 NDUFV2P19404 249 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 XIAPP98170 497 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 HSF5Q4G112 596 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-204ENST00000397443 ZNF789Q5FWF6 425 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 ZNF449Q6P9G9 518 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 LIPIQ6XZB0 460 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 Q6ZVL8 140 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 TAS2R42Q7RTR8 314 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 CROCCP2Q86T23 111 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 TDRPQ86YL5 185 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 CALML6Q8TD86 181 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 MRGPRX1Q96LB2 322 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 CPNE1Q99829 537 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 PPCSQ9HAB8 311 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 CD93Q9NPY3 652 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 EURLQ9NYK6 297 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 SLC30A1Q9Y6M5 507 aa21.13■□□□□ 0.97
CPNE1-204ENST00000397443 MUC3AQ02505 3323 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 AREL1O15033 823 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 SPAM1P38567 509 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 GP5P40197 560 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 SPINT3P49223 89 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 FZD5Q13467 585 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 NAB1Q13506 487 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 GAS6Q14393 721 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PSAPL1Q6NUJ1 521 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 CILP2Q8IUL8 1156 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PGBD3Q8N328 593 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 FBRSQ9HAH7 460 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PKD2L2Q9NZM6 624 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 GLYATL1P3A0A0U1RQE8 302 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PCDH8O95206 1070 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 AHSGP02765 367 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 ACADMP11310 421 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 UGT1A6P19224 532 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 UGT1A1P22309 533 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 UGT1A4P22310 534 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 GABRB3P28472 473 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PMLP29590 882 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 UGT1A3P35503 534 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 UGT1A5P35504 534 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 MRNIPQ6NTE8 343 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 CNTN4Q8IWV2 1026 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PIANPQ8IYJ0 282 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 RIBC1Q8N443 379 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-204ENST00000397443 SCAMP4Q969E2 229 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 PGM2Q96G03 612 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 ATP6V1G3Q96LB4 118 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 ABCG8Q9H221 673 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 MED4Q9NPJ6 270 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 LGALS13Q9UHV8 139 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 FADS3Q9Y5Q0 445 aa21.12■□□□□ 0.97
CPNE1-204ENST00000397443 NCOR1O75376 2440 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 TRIM49D1C9J1S8 452 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 GAPDHSO14556 408 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-204ENST00000397443 SRP72O76094 671 aaKnown RBP21.11■□□□□ 0.97
CPNE1-204ENST00000397443 HAUS5O94927 633 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 FOXN2P32314 431 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 TAS2R38P59533 333 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 CHRNA6Q15825 494 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 TMEM31Q5JXX7 168 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 SRRM1Q8IYB3 904 aaKnown RBP21.11■□□□□ 0.97
CPNE1-204ENST00000397443 C2CD4AQ8NCU7 369 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-204ENST00000397443 OR14C36Q8NHC7 312 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 GABPB2Q8TAK5 448 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-204ENST00000397443 KLF6Q99612 283 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-204ENST00000397443 ASB8Q9H765 288 aa21.11■□□□□ 0.97
CPNE1-204ENST00000397443 IQANK1A0A1B0GTG1 560 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 FAM47DPA6NHR8 397 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 H7C0S8 307 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 GABRG2P18507 467 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 SAT1P21673 171 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 PSMA3P25788 255 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 MAGOHP61326 146 aaKnown RBP21.1■□□□□ 0.97
CPNE1-204ENST00000397443 TTC31Q49AM3 519 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-204ENST00000397443 ANO7Q6IWH7 933 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 CNSTQ6PJW8 725 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 SDCCAG8Q86SQ7 713 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-204ENST00000397443 CXorf40AQ8TE69 158 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 RAB7BQ96AH8 199 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 RBBP8Q99708 897 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 SPATA16Q9BXB7 569 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 NSMCE4AQ9NXX6 385 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 ZNF180Q9UJW8 692 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 CRYL1Q9Y2S2 319 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 LRRK1Q38SD2 2015 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 A0A1W2PPM1 405 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 LZTS3O60299 673 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-204ENST00000397443 KRT37O76014 449 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 KRT38O76015 456 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 C6P13671 934 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 CA5AP35218 305 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 GRTP1Q5TC63 336 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 SYNPOQ8N3V7 929 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 HHIPQ96QV1 700 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 POLMQ9NP87 494 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-204ENST00000397443 APPL1Q9UKG1 709 aa21.1■□□□□ 0.97
CPNE1-204ENST00000397443 TRPM6Q9BX84 2022 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms