RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 COCHO43405 550 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 MGRN1O60291 552 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 CLDN7O95471 211 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 AHSGP02765 367 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 HLA-DPA1P20036 260 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 GPR17Q13304 367 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 PTPRRQ15256 657 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 LY6G5CQ5SRR4 150 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 PAQR3Q6TCH7 311 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 PLD6Q8N2A8 252 aaKnown RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 RAB42Q8N4Z0 105 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 ZMIZ2Q8NF64 920 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 ABTB1Q969K4 478 aaPredicted RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 IGSF21Q96ID5 467 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 TPD52L3Q96J77 140 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 FAM126AQ9BYI3 521 aaPredicted RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 ADAM7Q9H2U9 754 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 MIEF1Q9NQG6 463 aa11.15□□□□□ -0.62
IFT140-202ENST00000397417 DUS2Q9NX74 493 aaKnown RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 KIAA1522Q9P206 1035 aaPredicted RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 STX18Q9P2W9 335 aaKnown RBP11.15□□□□□ -0.62
IFT140-202ENST00000397417 PRMT5O14744 637 aaPredicted RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 PLIN3O60664 434 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 GJB3O75712 270 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 WDR47O94967 919 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 PKMP14618 531 aaKnown RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 ECT2LQ008S8 904 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 INPP5AQ14642 412 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 PPP2R2DQ66LE6 453 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 CAND1Q86VP6 1230 aaKnown RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 ANKRD46Q86W74 232 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 LZICQ8WZA0 190 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 POLR3BQ9NW08 1133 aaPredicted RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 Q9Y3F1 56 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 MCM3APO60318 1980 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 UNC5CO95185 931 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 TPSB2P20231 275 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 TTPAP49638 278 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 TPSAB1Q15661 275 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 HIST2H2ACQ16777 129 aaPredicted RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 HIST2H2AA3Q6FI13 130 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 CUZD1Q86UP6 607 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 HPS6Q86YV9 775 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 TMPRSS6Q8IU80 811 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 MMAAQ8IVH4 418 aaKnown RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 BBS7Q8IWZ6 715 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 OR56A4Q8NGH8 313 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 PPM1MQ96MI6 270 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 RBBP8Q99708 897 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 GLYATL1P3A0A0U1RQE8 302 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 ZNF839A8K0R7 811 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 PFKMP08237 780 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 PSMC3P17980 439 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 VIPR2P41587 438 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 GPM6BQ13491 265 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 DMC1Q14565 340 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 TSTD2Q5T7W7 516 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 CLNKQ7Z7G1 428 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 AP2M1Q96CW1 435 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 USP29Q9HBJ7 922 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 AASDHPPTQ9NRN7 309 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 CACNA2D2Q9NY47 1150 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 LIMD1Q9UGP4 676 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 MCM8Q9UJA3 840 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 TLR6Q9Y2C9 796 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 C15orf41Q9Y2V0 281 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
IFT140-202ENST00000397417 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 DTNAQ9Y4J8 743 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 NCOR1O75376 2440 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 DOCK3Q8IZD9 2030 aa11.14□□□□□ -0.63
IFT140-202ENST00000397417 MBLAC1A4D2B0 266 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 KRT6AP02538 564 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 KRT6BP04259 564 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 GRIA3P42263 894 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 KRT6CP48668 564 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CLCN5P51795 746 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 LIMK2P53671 638 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 FPGSQ05932 587 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ACSM2AQ08AH3 577 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 PARP15Q460N3 678 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 RALGPS1Q5JS13 557 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 KIAA0319Q5VV43 1072 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ACSM2BQ68CK6 577 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 GCNT7Q6ZNI0 430 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 PIWIL4Q7Z3Z4 852 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 PARGQ86W56 976 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CFAP206Q8IYR0 622 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SPPL2AQ8TCT8 520 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CXorf40AQ8TE69 158 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SCAMP4Q969E2 229 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms