RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 MARK2Q7KZI7 788 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 RASSF3Q86WH2 238 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 HDAC10Q969S8 669 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 CDKN2AIPNLQ96HQ2 116 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 TBATAQ96M53 351 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 PAFAH2Q99487 392 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 SH3GL2Q99962 352 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 DHRS4Q9BTZ2 278 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 ACBD3Q9H3P7 528 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 BPIFA1Q9NP55 256 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 EURLQ9NYK6 297 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 NCDNQ9UBB6 729 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 SLC24A2Q9UI40 661 aa16.91■□□□□ 0.3
TSPAN4-205ENST00000397406 CCDC162PA2VCL2 907 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 POC1B-GALNT4F8VUJ3 575 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 H7C0S8 307 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 RASGRF2O14827 1237 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 C1SP09871 688 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 STC1P52823 247 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 PRAMEP78395 509 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 NAB1Q13506 487 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 SIM2Q14190 667 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 KRT71Q3SY84 523 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 PIP5KL1Q5T9C9 394 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 TEDDM1Q5T9Z0 273 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 ERAP2Q6P179 960 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 LRRC6Q86X45 466 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 CACUL1Q86Y37 369 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 TDRPQ86YL5 185 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 TMPRSS6Q8IU80 811 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 CNTN4Q8IWV2 1026 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 CTAGE3PQ8IX95 158 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 PPM1NQ8N819 430 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 SLC44A1Q8WWI5 657 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 CDKL2Q92772 493 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 RAB7BQ96AH8 199 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 HHIPQ96QV1 700 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 SLC6A17Q9H1V8 727 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 SUDS3Q9H7L9 328 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 PPCSQ9HAB8 311 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 PPANQ9NQ55 473 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 SLC17A6Q9P2U8 582 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 FKBPLQ9UIM3 349 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 ITM2BQ9Y287 266 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 PKP3Q9Y446 797 aa16.9■□□□□ 0.3
TSPAN4-205ENST00000397406 OR51F1A6NGY5 319 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 SMIM23A6NLE4 172 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 GOLGA8KD6RF30 607 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 GOLGA8TH3BQL2 631 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 UGT1A9O60656 530 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 GOT2P00505 430 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 HADHAP40939 763 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 SLCO1A2P46721 670 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 ELP6Q0PNE2 266 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 RASA2Q15283 850 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 CRY1Q16526 586 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 AGBL4Q5VU57 503 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 PRR23BQ6ZRT6 265 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 CBARPQ8N350 705 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 DCAKDQ8WVC6 231 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 FAM131CQ96AQ9 280 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 AGAP2Q99490 1192 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 UGT1A7Q9HAW7 530 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 UGT1A10Q9HAW8 530 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 UGT1A8Q9HAW9 530 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 IARS2Q9NSE4 1012 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 DLL3Q9NYJ7 618 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 ZFATQ9P243 1243 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 CTNNAL1Q9UBT7 734 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 SERGEFQ9UGK8 458 aa16.89■□□□□ 0.29
TSPAN4-205ENST00000397406 TLDC2A0PJX2 215 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 GAPDHSO14556 408 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 BPIP17213 487 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 XIAPP98170 497 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 SPEM2Q0P670 501 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 PEX6Q13608 980 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 ARHGEF7Q14155 803 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 TMEM52BQ4KMG9 183 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 LAIR1Q6GTX8 287 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 NEPROQ6NW34 567 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 ADGRD1Q6QNK2 874 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 LIPIQ6XZB0 460 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 SYT13Q7L8C5 426 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 CROCCP2Q86T23 111 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 HDDC3Q8N4P3 179 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 MRRFQ96E11 262 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 SGSM3Q96HU1 749 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 MRGPRX1Q96LB2 322 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 FAM167BQ9BTA0 163 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 TMBIM4Q9HC24 238 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 LGALS13Q9UHV8 139 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 FADS3Q9Y5Q0 445 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 PSAT1Q9Y617 370 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 CEP250Q9BV73 2442 aa16.88■□□□□ 0.29
TSPAN4-205ENST00000397406 A0A1W2PP55 124 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 AP1G1O43747 822 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms