RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ASB1Q9Y576 335 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 V9GYQ6 96 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 MROH6A6NGR9 719 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 ANXA9O76027 345 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 IL12AP29459 219 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 POLR1BQ9H9Y6 1135 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 EML4Q9HC35 981 aaKnown RBP13.91□□□□□ -0.18
NUP98-204ENST00000397004 ENTPD7Q9NQZ7 604 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 ACTR3BQ9P1U1 418 aa13.91□□□□□ -0.18
NUP98-204ENST00000397004 GSK3BP49841 420 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 BMXP51813 675 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 SLC12A2P55011 1212 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 DSC2Q02487 901 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 BTLAQ7Z6A9 289 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 NAT16Q8N8M0 369 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ACDQ96AP0 544 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 FEM1CQ96JP0 617 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 FAR2Q96K12 515 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 TBC1D13Q9NVG8 400 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 TUBA8Q9NY65 449 aaPredicted RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 TIMM22Q9Y584 194 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 GPR45Q9Y5Y3 372 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 LDB2O43679 373 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 SLC4A1P02730 911 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 DNAJB2P25686 324 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 SHMT2P34897 504 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 RFC2P35250 354 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ATP4BP51164 291 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ADARB1P78563 741 aaKnown RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 ZNF33AQ06730 810 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 XAF1Q6GPH4 301 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 BLOC1S3Q6QNY0 202 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ZC3H7AQ8IWR0 971 aaKnown RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 PTGR2Q8N8N7 351 aaPredicted RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 TRPV3Q8NET8 790 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 RNF34Q969K3 372 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 GAD1Q99259 594 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 MID1IP1Q9NPA3 183 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 INTS7Q9NVH2 962 aaKnown RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 NEUROG3Q9Y4Z2 214 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 FADS3Q9Y5Q0 445 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 SMIM35A0A1B0GVV1 85 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 KANSL1LA0AUZ9 987 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 AQP12BA6NM10 295 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 INPP4BO15327 924 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 CD86P42081 329 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 PFKFB4Q16877 469 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 ACBD5Q5T8D3 534 aaPredicted RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 KANK2Q63ZY3 851 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 UGT3A1Q6NUS8 523 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 SCIMPQ6UWF3 145 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 CD300LGQ6UXG3 332 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 SCD5Q86SK9 330 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 AQP12AQ8IXF9 295 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 CLYBLQ8N0X4 340 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 OR2T11Q8NH01 316 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 MAGEE2Q8TD90 523 aaPredicted RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 DCPSQ96C86 337 aaKnown RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 CENPNQ96H22 339 aaPredicted RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 NSMCE3Q96MG7 304 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 PAIP1Q9H074 479 aaKnown RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 NMUR1Q9HB89 426 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 GALPQ9UBC7 116 aa13.9□□□□□ -0.18
NUP98-204ENST00000397004 FAF1Q9UNN5 650 aaPredicted RBP13.9□□□□□ -0.18
NUP98-204ENST00000397004 IRAK2O43187 625 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 F2P00734 622 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 F9P00740 461 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 NEDD8Q15843 81 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 KIAA0408Q6ZU52 694 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 RYBPQ8N488 228 aaPredicted RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 OR10T2Q8NGX3 314 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 LZICQ8WZA0 190 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 TBATAQ96M53 351 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 PKMYT1Q99640 499 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 HS3ST4Q9Y661 456 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 CASTOR2A6NHX0 329 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 HGFP14210 728 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 UGT1A1P22309 533 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 UGT1A4P22310 534 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 TPP2P29144 1249 aaPredicted RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 UGT1A3P35503 534 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 UGT1A5P35504 534 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 CYP51A1Q16850 503 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 LRRC43Q8N309 656 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
NUP98-204ENST00000397004 IMP4Q96G21 291 aaKnown RBP13.89□□□□□ -0.19
NUP98-204ENST00000397004 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms