RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NLGN4XQ8N0W4 816 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 AVL9Q8NBF6 648 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 NLGN4YQ8NFZ3 816 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 C9orf43Q8TAL5 461 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 PDCD6IPQ8WUM4 868 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 APOBEC4Q8WW27 367 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 SLC38A3Q99624 504 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 SNRNP25Q9BV90 132 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 EPB41L1Q9H4G0 881 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 STN1Q9H668 368 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 GPATCH2LQ9NWQ4 482 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 DNPEPQ9ULA0 475 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 ARHGEF17Q96PE2 2063 aaPredicted RBP17.44■□□□□ 0.38
EXOSC3-202ENST00000396521 BSNQ9UPA5 3926 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 GOLGA6CA6NDK9 693 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 GOLGA6BA6NDN3 693 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 LRRC10BA6NIK2 292 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 LGALS16A8MUM7 142 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 GOLGA6DP0CG33 693 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 GPR1P46091 355 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 MC2RQ01718 297 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 OGDHQ02218 1023 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 ABHD18Q0P651 414 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 SEPT6Q14141 434 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 CA9Q16790 459 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 ARMC12Q5T9G4 340 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 NKAIN2Q5VXU1 208 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 ZNF765Q7L2R6 523 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 HSD11B1LQ7Z5J1 315 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 PTRH1Q86Y79 214 aaKnown RBP17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 NRSN1Q8IZ57 195 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 NPWQ8N729 165 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 KCTD15Q96SI1 283 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 MGME1Q9BQP7 344 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 SPRY4Q9C004 299 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 EPN3Q9H201 632 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 SUDS3Q9H7L9 328 aaPredicted RBP17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 GOLGA6AQ9NYA3 693 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 LRRK1Q38SD2 2015 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 NBASA2RRP1 2371 aa17.43■□□□□ 0.38
EXOSC3-202ENST00000396521 TMEM191CA6NGB0 347 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 EFCAB7A8K855 629 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 H3BRJ5 948 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 PGLSO95336 258 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 GP1BBP13224 206 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 SLC2A4P14672 509 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 ZNF30P17039 623 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 TNFAIP3P21580 790 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 MIPP30301 263 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 ARL4AP40617 200 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 COPB1P53618 953 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 CDH6P55285 790 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 UBXN1Q04323 297 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 DPYSQ14117 519 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 PYCR3Q53H96 274 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 DENND2CQ68D51 928 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 ARHGAP22Q7Z5H3 698 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 TECPR1Q7Z6L1 1165 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 GALNT13Q8IUC8 556 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 SFRP1Q8N474 314 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 BMPERQ8N8U9 685 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 PATE1Q8WXA2 126 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 NOD2Q9HC29 1040 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 SARS2Q9NP81 518 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 HAUS2Q9NVX0 235 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 OCIAD1Q9NX40 245 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 CWC15Q9P013 229 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 LIMA1Q9UHB6 759 aaKnown RBP17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 PCSK1NQ9UHG2 260 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 TMEM184BQ9Y519 407 aaPredicted RBP17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 ST14Q9Y5Y6 855 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 DOPEY2Q9Y3R5 2298 aa17.42■□□□□ 0.38
EXOSC3-202ENST00000396521 CES1P23141 567 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 CSF2RBP32927 897 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 SERPINB6P35237 376 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 PCK1P35558 622 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 POLD2P49005 469 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 EPHA4P54764 986 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 MAP7Q14244 749 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 BOLA3Q53S33 107 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 MARC1Q5VT66 337 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 ANKS6Q68DC2 871 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 ARHGAP36Q6ZRI8 547 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 EXD1Q8NHP7 514 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 RTP4Q96DX8 246 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 NSMCE3Q96MG7 304 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 FANCLQ9NW38 375 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 VPS18Q9P253 973 aa17.41■□□□□ 0.38
EXOSC3-202ENST00000396521 SDK2Q58EX2 2172 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 CLEC18AA5D8T8 446 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 NPIPB15A6NHN6 443 aaPredicted RBP17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 MAFKO60675 156 aa17.4■□□□□ 0.38
EXOSC3-202ENST00000396521 PEX11BO96011 259 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms